https://w3id.org/np/RA6WyY9uv7SZEgda5D8_ru38bhuCKJtXDTxddsxfqHKvo
.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt
@prefix this: <https://w3id.org/np/RA6WyY9uv7SZEgda5D8_ru38bhuCKJtXDTxddsxfqHKvo> .
@prefix sub: <https://w3id.org/np/RA6WyY9uv7SZEgda5D8_ru38bhuCKJtXDTxddsxfqHKvo/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix dc: <http://purl.org/dc/terms/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
sub:Head {
this: a np:Nanopublication;
np:hasAssertion sub:assertion;
np:hasProvenance sub:provenance;
np:hasPublicationInfo sub:pubinfo .
}
sub:assertion {
<https://w3id.org/delphi/resource/assessment/aristotle-ha05-06--claim-test> a <https://w3id.org/delphi/ontology/Assessment>;
dc:description "The Europe PMC XML of PMC2595796 was fetched. It is marked scanned and does not contain the group names of Table 1 (birds, chelonians, lizards, snakes, crocodilians). The Europe PMC PDF render URL returned HTTP 403 with content type text/html; charset=UTF-8, so the table was not read. No bladder mark was entered from any other source.";
<http://www.w3.org/2000/01/rdf-schema#comment> "Measured: null fraction of non-mammal, non-chelonian groups in Bentley Table 1 marked as lacking a urinary bladder (n = 0, Table 1 is not in the Europe PMC XML, and the PDF request did not return a PDF). Interpretation: The History of Animals sentence says that animals which are not viviparous have no bladder except the tortoise, and that tortoises are oviparous. The test is that reproductive-mode claim. It is not the integument claim in Parts of Animals, which is scored separately. A group the table marks as variable has a bladder in some of its members, so it does not support 'no bladder'. The ostrich, if named, is not a tortoise.";
<http://www.w3.org/2000/01/rdf-schema#label> "Claim test of aristotle-ha05-06: inconclusive, confidence 0.84";
<http://www.w3.org/2000/01/rdf-schema#seeAlso> <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-ha05-06/result.json>;
prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7>;
<https://w3id.org/delphi/ontology/admissibleDatasets> "A checksummed comparative table of urinary-bladder presence by vertebrate group. A swim-bladder column is not a urinary bladder. The tortoise row is the stated exception and is not in the denominator.";
<https://w3id.org/delphi/ontology/assessmentType> "claim-test/0.1.0";
<https://w3id.org/delphi/ontology/dataKind> "none";
<https://w3id.org/delphi/ontology/disconfirmingObservation> "Fewer than half of those groups are marked as lacking a bladder.";
<https://w3id.org/delphi/ontology/evidenceAgainst> "A swim bladder was not used. FishBase GasBladder is a different organ and was not fetched.",
"Bentley 1979 is the planned table. The PMC record says the article is scanned, the XML has the abstract only, and the PDF URL returned HTTP 403 rather than a PDF.",
"No group was scored. Mammals, tortoises, birds, lizards, snakes, crocodilians, amphibians and fishes are all uncounted. This file does not use a bladder verdict from any other claim.";
<https://w3id.org/delphi/ontology/expectedObservation> "At least 90 percent of the non-mammal, non-chelonian groups in Bentley's table are marked as lacking a urinary bladder, with no non-tortoise exception named.";
<https://w3id.org/delphi/ontology/failCriterion> "Refutes if n >= 6 and f < 0.50. Mixed if n >= 6 and 0.50 <= f < 0.90. Inconclusive, reason underpowered, if n < 6. Inconclusive, reason data-unavailable, if the paper cannot be fetched or Table 1 cannot be read. Inconclusive, reason not-operationalizable, if the table has no absent-or-present marks.";
<https://w3id.org/delphi/ontology/hasConfidence> "0.84"^^xsd:double;
<https://w3id.org/delphi/ontology/hasEvidence> <https://w3id.org/delphi/resource/evidence/aristotle-ha05-06--claim-test--dataset-1>;
<https://w3id.org/delphi/ontology/hasVerdict> "inconclusive";
<https://w3id.org/delphi/ontology/hypothesis> "Vertebrate groups that are not viviparous lack a urinary bladder, with tortoises the only exception.";
<https://w3id.org/delphi/ontology/inferenceMethod> "f = groups marked absent, with no non-tortoise exception, divided by non-mammal non-chelonian groups in the table. Pass at f >= 0.90 and n >= 6. Refute at f < 0.50.";
<https://w3id.org/delphi/ontology/passCriterion> "Score the groups in Bentley 1979, Table 1 (PMC2595796), other than mammals and other than the tortoise exception. Mammals are left out because the table presents them as having a bladder and the claim is about animals that are not viviparous. Chelonia (tortoises and turtles) are the stated exception: a bladder in that group is recorded and is not a counterexample, and the group is not in the denominator. A group is consistent when the table marks the bladder absent, with no prose exception other than a tortoise. A mark of present, or of present-or-absent, is not consistent. Birds are not consistent if the paper says they lack a bladder except the ostrich. Let n be the scored groups and f the consistent fraction. The claim passes if n >= 6 and f >= 0.90.";
<https://w3id.org/delphi/ontology/preregistered> "false"^^xsd:boolean .
<https://w3id.org/delphi/resource/claim/aristotle-ha05-06> <https://w3id.org/delphi/ontology/hasAssessment>
<https://w3id.org/delphi/resource/assessment/aristotle-ha05-06--claim-test> .
<https://w3id.org/delphi/resource/evidence/aristotle-ha05-06--claim-test--dataset-1>
a <https://w3id.org/delphi/ontology/EvidenceItem>;
dc:description "Full text XML. It has the abstract and not Table 1. The PDF request is recorded in measured.extra and was not a PDF.";
dc:license "No Creative Commons URL is in the Europe PMC XML. The record is the open PMC entry for a 1979 Yale Journal of Biology and Medicine article marked scanned.";
<http://www.w3.org/2000/01/rdf-schema#label> "Dataset: Bentley PJ 1979, The vertebrate urinary bladder: osmoregulatory and other uses. Yale J Biol Med 52:563-568";
prov:atLocation <https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2595796/fullTextXML>;
prov:wasDerivedFrom <https://europepmc.org/article/PMC/PMC2595796>;
<https://w3id.org/delphi/ontology/hasChecksum> "sha256:bbee8080d6f53dabb274ae9db7b99973c76dee9cd7a08a7f74667b4d2b64be5f" .
}
sub:provenance {
<https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7> a prov:SoftwareAgent;
<http://www.w3.org/2000/01/rdf-schema#label> "delphisci claim tester (Grok 4.7; cursor/aristotle-life-history-g-a908)";
prov:actedOnBehalfOf <https://orcid.org/0009-0007-4948-9192>;
<https://w3id.org/delphi/ontology/usesModel> <https://w3id.org/delphi/resource/model/grok-4-7> .
<https://w3id.org/delphi/resource/model/grok-4-7> a <https://w3id.org/delphi/ontology/LanguageModel>;
dc:identifier "Grok 4.7" .
sub:assertion prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7>;
prov:wasDerivedFrom <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-ha05-06/result.json>;
prov:wasGeneratedBy sub:test .
sub:plan prov:hadPlan <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/README.md> .
sub:test a prov:Activity;
prov:qualifiedAssociation sub:plan;
prov:wasAssociatedWith <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7> .
}
sub:pubinfo {
this: dc:created "2026-11-08T16:24:31.762Z"^^xsd:dateTime;
dc:creator <https://orcid.org/0009-0007-4948-9192>;
dc:license <https://creativecommons.org/licenses/by/4.0/>;
npx:hasNanopubType <https://w3id.org/delphi/ontology/Assessment>;
npx:introduces <https://w3id.org/delphi/resource/assessment/aristotle-ha05-06--claim-test>;
<http://www.w3.org/2000/01/rdf-schema#label> "Claim test of aristotle-ha05-06: inconclusive, confidence 0.84";
<https://w3id.org/delphi/ontology/domain> <https://w3id.org/delphi/resource/domain/aristotle-biology> .
sub:sig npx:hasAlgorithm "RSA";
npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAyFHtPB6p0mCjDozxlOY9CmO3nBm7Te3jFbXyLmM+G1tGe47Da0jYIbhkl9Oo1ZjxmCa3LCwlEqK8gj6hEIcL4ahW30JXh9HycfKVk1bugkzMEV15tJdTzAU3sGMFnbNsn43xY2LFLy45tApkRm5byEiM7oRRrooIdwoQKnP4Wzq/bfAoJ9qvW+MGkelyOTd1jbSt+KfmT7xKmDfWzAHddUlWwMX2QJOLxDaffOteTop6ZRgPiNmPJKA/S62Gac9XtSYT3oDkZ6/nr5cxxNLpOyxTf5FPISiCe11xYO/unYjY+mwnOfA8yhJIyx1l0O9I0vpOpn+E5TvyHJV+oSTrvwIDAQAB";
npx:hasSignature "mIH9DhxNEazQuoeMsrpi9nIL4m72OG9g/AUpYLRrPeYWijtBItY+hGLkZiSg9j8+8tBj8hGUpUEcGFN5Nyf/zZ0C/416ILDjc/gLNdk8miFzOK79x5MYSExsfD5BoSNwvoWadugaGrT6WganqsZ/oJvta+/8dGcBthjNorxd82qfUURH0KeHeZgrhmFkOVtjOUurLq55XeWDpUaAvomo/tVT/ZN9zyw7OW7k4zBkN3OR1TD5zP0vwbjH7+QFXyB1f88Ki9R2lDKUh982Wl2PPdbFofz/ddP/yZSxm4X2K7rxH0cNiBsQdMHLn8CLieWu9uotpVTwqVS6dpsJ3QvfXg==";
npx:hasSignatureTarget this:;
npx:signedBy <https://orcid.org/0009-0007-4948-9192> .
}