https://w3id.org/np/RArVHqhTUSGVNr3GbklqHZlDP5esIzPu0izaCupI4k4hs
.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt
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sub:Head {
this: a np:Nanopublication;
np:hasAssertion sub:assertion;
np:hasProvenance sub:provenance;
np:hasPublicationInfo sub:pubinfo .
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sub:assertion {
<https://w3id.org/delphi/resource/assessment/morgan1915-08--claim-test> a <https://w3id.org/delphi/ontology/Assessment>;
dc:description "Genomic start coordinates of the seven genes on the X, checked for strict monotonicity in the 1915 map order.";
<http://www.w3.org/2000/01/rdf-schema#comment> "Measured: 1 1 if the seven loci are in 1915 map order on the genome, else 0 (n = 7, exact (ordering)). Interpretation: A pure order test, independent of distances. Gene symbols looked up in the FlyBase map table: y, w, bi, v, m, s, B.";
<http://www.w3.org/2000/01/rdf-schema#label> "Claim test of morgan1915-08: supports, confidence 0.95";
<http://www.w3.org/2000/01/rdf-schema#seeAlso> <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/evolution-after-darwin/morgan1915-08/result.json>;
prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-claude-fable-5-1>;
<https://w3id.org/delphi/ontology/admissibleDatasets> "Planned datasets: flybase-gene-map-table";
<https://w3id.org/delphi/ontology/assessmentType> "claim-test/0.1.0";
<https://w3id.org/delphi/ontology/dataKind> "biological";
<https://w3id.org/delphi/ontology/disconfirmingObservation> "Any adjacent pair out of order: refutes. Any locus missing from the table: inconclusive.";
<https://w3id.org/delphi/ontology/evidenceAgainst> "Seven loci; a finer test would take every locus on the 1915 frontispiece map, which is not in the claims file.";
<https://w3id.org/delphi/ontology/expectedObservation> "The genomic start coordinates of the seven genes (FlyBase sequence_loc, X chromosome) are strictly increasing in the order y, w, bi, v, m, s, B (or strictly decreasing, orientation being a convention): supports.";
<https://w3id.org/delphi/ontology/failCriterion> "Any adjacent pair out of order: refutes. Any locus missing from the table: inconclusive.";
<https://w3id.org/delphi/ontology/hasConfidence> "0.95"^^xsd:double;
<https://w3id.org/delphi/ontology/hasEvidence> <https://w3id.org/delphi/resource/evidence/morgan1915-08--claim-test--dataset-1>;
<https://w3id.org/delphi/ontology/hasVerdict> "supports";
<https://w3id.org/delphi/ontology/hypothesis> "If the order of factors on the 1915 map is real, the seven X-chromosome loci yellow, white, bifid, vermilion, miniature, sable, Bar lie on the genome in that order.";
<https://w3id.org/delphi/ontology/inferenceMethod> "Genomic start coordinates of the seven genes on the X, checked for strict monotonicity in the 1915 map order.";
<https://w3id.org/delphi/ontology/passCriterion> "The genomic start coordinates of the seven genes (FlyBase sequence_loc, X chromosome) are strictly increasing in the order y, w, bi, v, m, s, B (or strictly decreasing, orientation being a convention): supports.";
<https://w3id.org/delphi/ontology/preregistered> "true"^^xsd:boolean .
<https://w3id.org/delphi/resource/claim/morgan1915-08> <https://w3id.org/delphi/ontology/hasAssessment>
<https://w3id.org/delphi/resource/assessment/morgan1915-08--claim-test> .
<https://w3id.org/delphi/resource/evidence/morgan1915-08--claim-test--dataset-1> a
<https://w3id.org/delphi/ontology/EvidenceItem>;
dc:description "";
dc:license "CC BY 4.0";
<http://www.w3.org/2000/01/rdf-schema#label> "Dataset: FlyBase precomputed gene map table FB2026_03 (D. melanogaster Release 6 coordinates)";
prov:atLocation <https://s3ftp.flybase.org/releases/current/precomputed_files/genes/gene_map_table_fb_2026_03.tsv.gz>,
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sub:provenance {
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prov:SoftwareAgent;
<http://www.w3.org/2000/01/rdf-schema#label> "delphisci claim tester (claude-fable-5.1; evolution-after-darwin-tests-1)";
prov:actedOnBehalfOf <https://orcid.org/0009-0007-4948-9192>;
<https://w3id.org/delphi/ontology/usesModel> <https://w3id.org/delphi/resource/model/claude-fable-5-1> .
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dc:identifier "claude-fable-5.1" .
sub:assertion prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-claude-fable-5-1>;
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prov:wasGeneratedBy sub:test .
sub:plan prov:hadPlan <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/README.md> .
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prov:qualifiedAssociation sub:plan;
prov:wasAssociatedWith <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-claude-fable-5-1> .
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sub:pubinfo {
this: dc:created "2026-11-08T16:24:31.868Z"^^xsd:dateTime;
dc:creator <https://orcid.org/0009-0007-4948-9192>;
dc:license <https://creativecommons.org/licenses/by/4.0/>;
npx:hasNanopubType <https://w3id.org/delphi/ontology/Assessment>;
npx:introduces <https://w3id.org/delphi/resource/assessment/morgan1915-08--claim-test>;
<http://www.w3.org/2000/01/rdf-schema#label> "Claim test of morgan1915-08: supports, confidence 0.95";
<https://w3id.org/delphi/ontology/domain> <https://w3id.org/delphi/resource/domain/evolution-after-darwin> .
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