@prefix this: <https://w3id.org/np/RAtA9zzXIe9KbZT5cBhvzXiSSF7H97_kDR3_BeKC9wzL8> .
@prefix sub: <https://w3id.org/np/RAtA9zzXIe9KbZT5cBhvzXiSSF7H97_kDR3_BeKC9wzL8/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix dc: <http://purl.org/dc/terms/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>
    a prov:SoftwareAgent;
    <http://www.w3.org/2000/01/rdf-schema#label> "delphisci dataset-resolvability assessor (GPT-5.6 Sol)";
    prov:actedOnBehalfOf <https://orcid.org/0009-0007-4948-9192>;
    <https://w3id.org/delphi/ontology/usesModel> <https://w3id.org/delphi/resource/model/gpt-5.6-sol-medium> .
  
  <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt> a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
    dc:description "The formula supplies measurable predictors and a direct model-comparison test. Structural data are abundant, but matching open mechanical data are scattered and likely cover only a limited set of protein domains, while parameter degeneracy weakens a strong test of the asserted architectural mechanism.";
    dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0>;
    <http://www.w3.org/2000/01/rdf-schema#comment> "Proposed test with existing data: Derive bond-cluster size and arrangement from experimental protein structures, fit the stated force-versus-loading-rate relation to independent unfolding measurements, and compare held-out predictions with an ordinary Bell model lacking hierarchy. A reproducible predictive gain tied to measured architecture would support the structure-property relationship; no gain or inconsistent fitted architectural parameters would refute it for the tested domains.";
    <http://www.w3.org/2000/01/rdf-schema#label> "GPT-5.6 Sol on buehler-2007-hierarchies-03: partially-resolvable, resolvability 0.54";
    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
    <https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0";
    <https://w3id.org/delphi/ontology/evidenceAgainst> "A good fit alone may not distinguish this model from other multi-barrier models.",
      "Hydrogen-bond energy and barrier distance can be non-identifiable when fitted together.",
      "Mechanical measurements and structures may not refer to identical constructs and conditions.";
    <https://w3id.org/delphi/ontology/hasConfidence> "0.65"^^xsd:double;
    <https://w3id.org/delphi/ontology/hasEvidence> <https://w3id.org/delphi/resource/evidence/buehler-2007-hierarchies-03--gpt--dataset-1>,
      <https://w3id.org/delphi/resource/evidence/buehler-2007-hierarchies-03--gpt--dataset-2>;
    <https://w3id.org/delphi/ontology/hasScore> "0.543"^^xsd:double;
    <https://w3id.org/delphi/ontology/hasVerdict> "partially-resolvable" .
  
  <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt--analysis-feasibility>
    a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
    dc:isPartOf <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt>;
    dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-analysis-feasibility>;
    <http://www.w3.org/2000/01/rdf-schema#label> "Analysis feasibility of buehler-2007-hierarchies-03 by GPT-5.6 Sol: 0.57";
    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
    <https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0/analysis-feasibility";
    <https://w3id.org/delphi/ontology/hasScore> "0.57"^^xsd:double .
  
  <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt--data-adequacy>
    a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
    dc:isPartOf <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt>;
    dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-data-adequacy>;
    <http://www.w3.org/2000/01/rdf-schema#label> "Data adequacy of buehler-2007-hierarchies-03 by GPT-5.6 Sol: 0.34";
    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
    <https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0/data-adequacy";
    <https://w3id.org/delphi/ontology/hasScore> "0.34"^^xsd:double .
  
  <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt--data-existence>
    a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
    dc:isPartOf <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt>;
    dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-data-existence>;
    <http://www.w3.org/2000/01/rdf-schema#label> "Data existence of buehler-2007-hierarchies-03 by GPT-5.6 Sol: 0.43";
    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
    <https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0/data-existence";
    <https://w3id.org/delphi/ontology/hasScore> "0.43"^^xsd:double .
  
  <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt--discriminating-power>
    a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
    dc:isPartOf <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt>;
    dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-discriminating-power>;
    <http://www.w3.org/2000/01/rdf-schema#label> "Discriminating power of buehler-2007-hierarchies-03 by GPT-5.6 Sol: 0.61";
    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
    <https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0/discriminating-power";
    <https://w3id.org/delphi/ontology/hasScore> "0.61"^^xsd:double .
  
  <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt--operationalizability>
    a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
    dc:isPartOf <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt>;
    dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-operationalizability>;
    <http://www.w3.org/2000/01/rdf-schema#label> "Operationalizability of buehler-2007-hierarchies-03 by GPT-5.6 Sol: 0.8";
    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
    <https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0/operationalizability";
    <https://w3id.org/delphi/ontology/hasScore> "0.8"^^xsd:double .
  
  <https://w3id.org/delphi/resource/claim/buehler-2007-hierarchies-03> <https://w3id.org/delphi/ontology/hasAssessment>
      <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt>, <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt--analysis-feasibility>,
      <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt--data-adequacy>,
      <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt--data-existence>,
      <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt--discriminating-power>,
      <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt--operationalizability> .
  
  <https://w3id.org/delphi/resource/evidence/buehler-2007-hierarchies-03--gpt--dataset-1>
    a <https://w3id.org/delphi/ontology/EvidenceItem>;
    dc:description "experimental structures from which hydrogen-bond architecture can be measured";
    <http://www.w3.org/2000/01/rdf-schema#label> "Candidate dataset: RCSB Protein Data Bank";
    prov:wasDerivedFrom <https://www.rcsb.org/> .
  
  <https://w3id.org/delphi/resource/evidence/buehler-2007-hierarchies-03--gpt--dataset-2>
    a <https://w3id.org/delphi/ontology/EvidenceItem>;
    dc:description "repository to locate public force-spectroscopy data and supplements";
    <http://www.w3.org/2000/01/rdf-schema#label> "Candidate dataset: BioStudies";
    prov:wasDerivedFrom <https://www.ebi.ac.uk/biostudies/> .
  
  <https://w3id.org/delphi/resource/model/gpt-5.6-sol-medium> a <https://w3id.org/delphi/ontology/LanguageModel>;
    dc:identifier "gpt-5.6-sol-medium";
    <http://www.w3.org/2000/01/rdf-schema#label> "GPT-5.6 Sol" .
}

sub:provenance {
  sub:assertion prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
    prov:wasDerivedFrom <https://github.com/fractastical/delphisci/blob/67fe5b156cfeca15a2ded33e0face4177d03101c/claim-sources/buehler-protein-materials/assessment/raw/gpt/batch-1.json>,
      <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0>;
    prov:wasGeneratedBy sub:assessment .
  
  sub:assessment a prov:Activity;
    prov:qualifiedAssociation sub:assessmentPlan;
    prov:wasAssociatedWith <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium> .
  
  sub:assessmentPlan prov:hadPlan <https://github.com/fractastical/delphisci/blob/67fe5b156cfeca15a2ded33e0face4177d03101c/claim-sources/buehler-protein-materials/README.md> .
}

sub:pubinfo {
  <https://w3id.org/delphi/resource/domain/buehler-protein-materials> <http://www.w3.org/2000/01/rdf-schema#label>
      "buehler-protein-materials" .
  
  this: dc:created "2026-11-08T04:48:50.317Z"^^xsd:dateTime;
    dc:creator <https://orcid.org/0009-0007-4948-9192>;
    dc:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:hasNanopubType <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
    npx:introduces <https://w3id.org/delphi/resource/assessment/buehler-2007-hierarchies-03--gpt>;
    <http://www.w3.org/2000/01/rdf-schema#label> "GPT-5.6 Sol on buehler-2007-hierarchies-03: partially-resolvable, resolvability 0.54";
    <https://w3id.org/delphi/ontology/domain> <https://w3id.org/delphi/resource/domain/buehler-protein-materials> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAyFHtPB6p0mCjDozxlOY9CmO3nBm7Te3jFbXyLmM+G1tGe47Da0jYIbhkl9Oo1ZjxmCa3LCwlEqK8gj6hEIcL4ahW30JXh9HycfKVk1bugkzMEV15tJdTzAU3sGMFnbNsn43xY2LFLy45tApkRm5byEiM7oRRrooIdwoQKnP4Wzq/bfAoJ9qvW+MGkelyOTd1jbSt+KfmT7xKmDfWzAHddUlWwMX2QJOLxDaffOteTop6ZRgPiNmPJKA/S62Gac9XtSYT3oDkZ6/nr5cxxNLpOyxTf5FPISiCe11xYO/unYjY+mwnOfA8yhJIyx1l0O9I0vpOpn+E5TvyHJV+oSTrvwIDAQAB";
    npx:hasSignature "CNYc8gMxdCrwyeYD2SIIGuWthHOhBdUK65McmMjQMS40Tp2jtUA+76swhHR5A8AX5qeltuwYjL5t5FQmQX4aOVeQbsilILa7EVO+lquje9g3ZYcBnKR0Ye3m6DlQV7tPv8f0Iq+rwVy1C1yf9nq4MTm6A/7yNLa8O+fhAwCwDMEBsWCueZj81OMK0chbcj7kGzbbGvuzMAHmQ2aGIpQmf5P5ngyGkXpin2gL8l0Nw9P8Oyc2BEOTwm7kLr50s50VbMhzN+vKZXt0QRSXSllkYhq7nh7I8zEqMLAMsFkk8CGklvxLCZabgJHvY9Pqw+sbxJi0lAVxKm1M0HETbyo7yQ==";
    npx:hasSignatureTarget this:;
    npx:signedBy <https://orcid.org/0009-0007-4948-9192> .
}