[ { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/pubinfo", "@graph": [ { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA", "http://purl.org/dc/terms/created": [ { "@value": "2026-11-08T16:24:31.770Z", "@type": "http://www.w3.org/2001/XMLSchema#dateTime" } ], "http://purl.org/dc/terms/creator": [ { "@id": "https://orcid.org/0009-0007-4948-9192" } ], "http://purl.org/dc/terms/license": [ { "@id": "https://creativecommons.org/licenses/by/4.0/" } ], "http://purl.org/nanopub/x/hasNanopubType": [ { "@id": "https://w3id.org/delphi/ontology/Assessment" } ], "http://purl.org/nanopub/x/introduces": [ { "@id": "https://w3id.org/delphi/resource/assessment/aristotle-ha06-08--claim-test--pr-110" } ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Claim test of aristotle-ha06-08 (pr-110): supports, confidence 0.68" } ], "https://w3id.org/delphi/ontology/domain": [ { "@id": "https://w3id.org/delphi/resource/domain/aristotle-biology" } ] }, { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/sig", "http://purl.org/nanopub/x/hasAlgorithm": [ { "@value": "RSA" } ], "http://purl.org/nanopub/x/hasPublicKey": [ { "@value": "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAyFHtPB6p0mCjDozxlOY9CmO3nBm7Te3jFbXyLmM+G1tGe47Da0jYIbhkl9Oo1ZjxmCa3LCwlEqK8gj6hEIcL4ahW30JXh9HycfKVk1bugkzMEV15tJdTzAU3sGMFnbNsn43xY2LFLy45tApkRm5byEiM7oRRrooIdwoQKnP4Wzq/bfAoJ9qvW+MGkelyOTd1jbSt+KfmT7xKmDfWzAHddUlWwMX2QJOLxDaffOteTop6ZRgPiNmPJKA/S62Gac9XtSYT3oDkZ6/nr5cxxNLpOyxTf5FPISiCe11xYO/unYjY+mwnOfA8yhJIyx1l0O9I0vpOpn+E5TvyHJV+oSTrvwIDAQAB" } ], "http://purl.org/nanopub/x/hasSignature": [ { "@value": "kBKo0wm7dEZEsmXlp/MzTixUxcfZMa4XeLt1g6RjeTMQZyRS0VmTo3DlffOSvm/SFQ4HUVRLmlXECyZzNuWW+AYr5mqX55gz5nyO7iJwmq2R0/qbBMv77HxUMiFY3kK/ncf5nT3Jevvs0IQFR8RCejbYMt5Em3F9HLyBGvn+/ij6mwaa3qRjf58pChM1kozJshWvJJkyPvR0Inb/gML0B/Soqd+vRQlkPjH6RWMQF9FiggxFGyPUYlDvlrcLSluh488AS3G6tdpc3+qC117Z3Y52AerGBc60+SCqHzMKwZfKeHns+Fjo1b7FMIVcEUusi5g6X7pvQvP9W4Sq+0+PpA==" } ], "http://purl.org/nanopub/x/hasSignatureTarget": [ { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA" } ], "http://purl.org/nanopub/x/signedBy": [ { "@id": "https://orcid.org/0009-0007-4948-9192" } ] } ] }, { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/assertion", "@graph": [ { "@id": "https://w3id.org/delphi/resource/assessment/aristotle-ha06-08--claim-test--pr-110", "http://purl.org/dc/terms/description": [ { "@value": "Downloaded the AnAge build zip, read anage_data.txt, kept Class Aves rows with a positive female maturity in days, and computed the proportion under 365 days. The pre-registered cutoffs 0.15 and 0.40 set the verdict. Proportions that drop questionable rows, or that use 365 and 730 days, are reported and were not used for the verdict." } ], "@type": [ "https://w3id.org/delphi/ontology/Assessment" ], "http://www.w3.org/2000/01/rdf-schema#comment": [ { "@value": "Measured: 0.11458333333333333 proportion of bird species with female maturity under 365 days (n = 864). Interpretation: Aristotle's 'propagate within their first year' is read as female sexual maturity strictly before the first birthday (365 days). AnAge's female maturity field is the measurable stand-in for age at first breeding. 'Very few' is fixed in advance as at most 15 percent of species with data; 40 percent or more is common enough to refute that wording. This is a species compilation, not a count of individual birds, and it does not weight species by abundance." } ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Claim test of aristotle-ha06-08 (pr-110): supports, confidence 0.68" } ], "http://www.w3.org/2000/01/rdf-schema#seeAlso": [ { "@id": "https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-ha06-08/pr-110/result.json" } ], "http://www.w3.org/ns/prov#wasAttributedTo": [ { "@id": "https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7" } ], "https://w3id.org/delphi/ontology/admissibleDatasets": [ { "@value": "A public species-level life-history compilation, independent of Aristotle's text, that records age at female sexual maturity in days for birds, with a retrievable file, licence, and checksum. Captive and wild records are both admissible; the claim does not restrict origin." } ], "https://w3id.org/delphi/ontology/assessmentType": [ { "@value": "claim-test/0.1.0" } ], "https://w3id.org/delphi/ontology/dataKind": [ { "@value": "biological" } ], "https://w3id.org/delphi/ontology/disconfirmingObservation": [ { "@value": "At least 40 percent of those bird species have female maturity under 365 days, so breeding within the first year is common rather than very rare." } ], "https://w3id.org/delphi/ontology/evidenceAgainst": [ { "@value": "Assessments were read only as hints for which public database to use. No assessor number is a measurement." }, { "@value": "Confidence rule, fixed now: 0.80 if the verdict is supports and p <= 0.10, or refutes and p >= 0.50; 0.68 if supports or refutes closer to the cutoff; 0.55 if mixed; 0.40 if inconclusive." }, { "@value": "Many AnAge maturity records are from captivity. The primary proportion does not drop them." }, { "@value": "Written before this session downloaded or read anage_data.txt. Column names are taken from the AnAge schema documented by the datawookie/anage reader and from the HAGR download page, not from the trait values." } ], "https://w3id.org/delphi/ontology/expectedObservation": [ { "@value": "At most 15 percent of bird species with a recorded female maturity age in AnAge reach sexual maturity before 365 days." } ], "https://w3id.org/delphi/ontology/failCriterion": [ { "@value": "Pre-registered. The claim is refuted if n >= 40 and p >= 0.40. If n >= 40 and 0.15 < p < 0.40, the verdict is mixed. If n < 40, or the AnAge table lacks the maturity or class columns, the verdict is inconclusive with reason underpowered or data-unavailable." } ], "https://w3id.org/delphi/ontology/hasConfidence": [ { "@value": "0.68", "@type": "http://www.w3.org/2001/XMLSchema#double" } ], "https://w3id.org/delphi/ontology/hasEvidence": [ { "@id": "https://w3id.org/delphi/resource/evidence/aristotle-ha06-08--claim-test--pr-110--dataset-1" } ], "https://w3id.org/delphi/ontology/hasVerdict": [ { "@value": "supports" } ], "https://w3id.org/delphi/ontology/hypothesis": [ { "@value": "If very few birds breed within their first year, then among bird species with a recorded female age at sexual maturity, the share whose maturity falls before 365 days is small." } ], "https://w3id.org/delphi/ontology/inferenceMethod": [ { "@value": "Species are the unit. p = (number of Aves rows with female maturity days < 365) / (number of Aves rows with female maturity days > 0). Thresholds are the pre-registered 0.15 and 0.40 cutoffs. No model is fitted. A second proportion that drops rows whose Data quality is 'questionable', and proportions with maturity <= 365 days and < 730 days, are reported and do not set the verdict." } ], "https://w3id.org/delphi/ontology/passCriterion": [ { "@value": "Pre-registered. Using AnAge rows with Class 'Aves' (case-insensitive) and a positive numeric Female maturity (days): let p be the proportion with maturity strictly under 365 days, and n the number of such species. The claim is supported if n >= 40 and p <= 0.15. Maturity of exactly 365 days is the first birthday and does not count as within the first year." } ], "https://w3id.org/delphi/ontology/preregistered": [ { "@value": "false", "@type": "http://www.w3.org/2001/XMLSchema#boolean" } ] }, { "@id": "https://w3id.org/delphi/resource/evidence/aristotle-ha06-08--claim-test--pr-110--dataset-1", "http://purl.org/dc/terms/description": [ { "@value": "female age at sexual maturity for bird species" } ], "http://purl.org/dc/terms/license": [ { "@value": "CC BY 3.0 (Human Ageing Genomic Resources terms)" } ], "@type": [ "https://w3id.org/delphi/ontology/EvidenceItem" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Dataset: AnAge: The Animal Ageing and Longevity Database, build 15" } ], "http://www.w3.org/ns/prov#atLocation": [ { "@id": "https://genomics.senescence.info/species/dataset.zip" } ], "http://www.w3.org/ns/prov#wasDerivedFrom": [ { "@id": "https://genomics.senescence.info/species/" } ], "https://w3id.org/delphi/ontology/hasChecksum": [ { "@value": "sha256:e3ddb66e32e973a79932859ba53013e8f60d957c6ec01c6eb573e3ea3018d630" } ] }, { "@id": "https://w3id.org/delphi/resource/claim/aristotle-ha06-08", "https://w3id.org/delphi/ontology/hasAssessment": [ { "@id": "https://w3id.org/delphi/resource/assessment/aristotle-ha06-08--claim-test--pr-110" } ] } ] }, { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/provenance", "@graph": [ { "@id": "https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7", "@type": [ "http://www.w3.org/ns/prov#SoftwareAgent" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "delphisci claim tester (Grok 4.7; cursor/aristotle-claim-tests-a5fd)" } ], "http://www.w3.org/ns/prov#actedOnBehalfOf": [ { "@id": "https://orcid.org/0009-0007-4948-9192" } ], "https://w3id.org/delphi/ontology/usesModel": [ { "@id": "https://w3id.org/delphi/resource/model/grok-4-7" } ] }, { "@id": "https://w3id.org/delphi/resource/model/grok-4-7", "http://purl.org/dc/terms/identifier": [ { "@value": "Grok 4.7" } ], "@type": [ "https://w3id.org/delphi/ontology/LanguageModel" ] }, { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/assertion", "http://www.w3.org/ns/prov#wasAttributedTo": [ { "@id": "https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7" } ], "http://www.w3.org/ns/prov#wasDerivedFrom": [ { "@id": "https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-ha06-08/pr-110/result.json" } ], "http://www.w3.org/ns/prov#wasGeneratedBy": [ { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/test" } ] }, { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/test", "@type": [ "http://www.w3.org/ns/prov#Activity" ], "http://www.w3.org/ns/prov#qualifiedAssociation": [ { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/plan" } ], "http://www.w3.org/ns/prov#wasAssociatedWith": [ { "@id": "https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7" } ] }, { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/plan", "http://www.w3.org/ns/prov#hadPlan": [ { "@id": "https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/README.md" } ] } ] }, { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/Head", "@graph": [ { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA", "http://www.nanopub.org/nschema#hasAssertion": [ { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/assertion" } ], "http://www.nanopub.org/nschema#hasProvenance": [ { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo": [ { "@id": "https://w3id.org/np/RAsJRCq-Q-r8LYeACqJAu-cc1C_HPk52GFkAutVim07qA/pubinfo" } ], "@type": [ "http://www.nanopub.org/nschema#Nanopublication" ] } ] } ]