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Each specimen\'s 39 log distances were centred on their mean (log geometric-mean size correction); species means were taken; the log ratio Pan troglodytes / Homo was formed for each distance. Each of the 21 landmarks was assigned to an ordered region of the human skull from its anatomical name (1 neurocranium/vault/cranial base: BR LD AS OPI BA JP APET EAM SP TS KR; 2 orbit/upper face/nasal/zygomatic arch: NA FM ZS ZYGO NSL; 3 maxilla/palate/alveolar: IS PM PNS MT ZI), and each distance scored by the mean of its endpoint ranks. Spearman rho between score and log ratio, medians by region and a bootstrap over specimens (2000 resamples) were computed; Gorilla and Pan paniscus were run as replications that do not enter the verdict." } g_iri { prefix_id: 2 name_id: 4 } } } rows { prefix { value: "https://w3id.org/delphi/ontology/" } } rows { name { value: "Assessment" } } rows { quad { p_iri { prefix_id: 4 name_id: 10 } o_iri { prefix_id: 10 name_id: 14 } } } rows { prefix { value: "http://www.w3.org/2000/01/rdf-schema#" } } rows { name { value: "comment" } } rows { quad { p_iri { prefix_id: 11 } o_literal { lex: "Measured: 0.6962 Spearman rho (region score vs size-corrected log distance ratio Pan troglodytes/Homo) (n = 39, bootstrap 95% CI over specimens 0.664-0.732; p = 8.6e-7). Interpretation: Thompson\'s grids compare lateral profile drawings of one human, one chimpanzee and one baboon skull. His claim has two parts: (1) the human-to-ape change is a single smooth deformation, not independent changes of jaws, braincase and face; (2) within that deformation the local area ratio increases \'in a gradual and approximately logarithmic order\' downwards and forwards, i.e. the logarithm of the area ratio grows roughly linearly with position along the down-forward direction. Both are operationalized on species mean landmark configurations via a thin-plate spline (the modern formalisation of Thompson\'s coordinate transformation): smoothness and single-gradient structure are measured by how much of the variation in log local area ratio is explained by a linear gradient in down-forward position, and the \'logarithmic order\' by the sign and strength of that gradient. Searches of Dryad, Zenodo and figshare on 2026-10-31 found no public per-specimen landmark set containing Papio together with Homo and Pan; MorphoSource and Phenome10K scans require a login and would also require digitising landmarks, which is beyond this test. The Zenodo deposit of Schroeder & von Cramon-Taubadel (2017, Evolution) covers 15 extant hominoid taxa including Homo and Pan; its exact contents (coordinates vs distances, per specimen vs summary) were not inspected before this pre-registration, which is why primary and secondary plans are both stated." } } } rows { name { value: "label" } } rows { quad { p_iri { } o_literal { lex: "Claim test of thompson1917-ch17-16: supports, confidence 0.5" } } } rows { name { value: "seeAlso" } } rows { prefix { value: "https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/thompson-growth-form/thompson1917-ch17-16/" } } rows { name { value: "result.json" } } rows { quad { p_iri { } o_iri { prefix_id: 12 } } } rows { name { value: "wasAttributedTo" } } rows { prefix { value: "https://w3id.org/delphi/resource/agent/" } } rows { name { value: "delphisci-claim-tester-claude-fable-5-1" } } rows { quad { p_iri { prefix_id: 5 } o_iri { prefix_id: 13 } } } rows { name { value: "admissibleDatasets" } } rows { quad { p_iri { prefix_id: 10 } o_literal { lex: "Planned datasets: zenodo-4976293-schroeder-voncramontaubadel-2017-hominoid-crania" } } } rows { name { value: "assessmentType" } } rows { quad { p_iri { } o_literal { lex: "claim-test/0.1.0" } } } rows { name { value: "dataKind" } } rows { quad { p_iri { } o_literal { lex: "biological" } } } rows { name { value: "disconfirmingObservation" } } rows { quad { p_iri { } o_literal { lex: "Pre-registered. Refuted if Spearman rho(u, log J) < 0.3 (primary plan) or rho(region rank, log ratio) < 0.3 (secondary plan), or if the correlation of log J with x_forward and with y_downward have opposite signs (expansion forwards but contraction downwards or vice versa), or if the regression of log J on u explains < 25% of the variance while log J differs between anatomical regions in a non-monotone way (patchwork rather than gradient). Results between the pass and fail thresholds are \'mixed\'. If the deposited file contains neither coordinates nor named inter-landmark distances per specimen (e.g. only summary statistics), the verdict is inconclusive with reason data-unavailable." } } } rows { name { value: "evidenceAgainst" } } rows { quad { p_iri { } o_literal { lex: "No baboon (Papio) data were available; Thompson\'s statement that the baboon shows \'the same order\' of deformation with greater intensity is untested. Gorilla, which Thompson also mentions, shows the same gradient with a steeper slope (0.28 vs 0.22 log units per region step), consistent with his \'increased intensity\' remark." } } } rows { quad { o_literal { lex: "Secondary (weaker) plan: the deposit gives inter-landmark distances, not landmark coordinates, so no thin-plate-spline area ratios could be computed; distance ratios are linear rather than areal scale factors and position is an ordinal three-level region score assigned by the analyst from landmark names, not a measured coordinate." } } } rows { quad { o_literal { lex: "Spearman p-values treat the 39 distances as independent, which they are not (shared endpoints); the bootstrap CI over specimens does not address this dependence either." } } } rows { quad { o_literal { lex: "Species means of adult crania of mixed sex were compared; the dataset\'s log distances are size-corrected by geometric mean, so the test concerns shape, whereas Thompson\'s figures also carried a size difference." } } } rows { quad { o_literal { lex: "The relation is monotone and roughly linear in log ratio across region ranks (R^2 0.48 for Pan, 0.51 for Gorilla), which is what \'approximately logarithmic order\' predicts, but with only three ordinal positions a linear trend cannot be distinguished from other monotone shapes." } } } rows { quad { o_literal { lex: "Within the neurocranium, cranial-base distances (APET-BA, KR-SP, BA-EAM) have positive log ratios while vault distances (BR-LD, LD-AS, OPI-LD) are strongly negative, in line with Thompson\'s claim that the gradient runs downwards as well as forwards; this was not a pre-registered test." } } } rows { name { value: "expectedObservation" } } rows { quad { p_iri { } o_literal { lex: "Pre-registered. Primary plan (landmark coordinates available for Homo sapiens and Pan troglodytes): generalised Procrustes superimposition of all specimens; species mean configurations; projection of the means onto the midsagittal plane (midline landmarks as they are, bilateral landmarks averaged across sides) giving a lateral profile with x = antero-posterior and y = supero-inferior axes defined by the Frankfurt-like orientation of the human mean; fit a 2-D thin-plate spline mapping the human mean to the chimpanzee mean and evaluate its Jacobian determinant J (local area ratio chimpanzee/human) at every landmark of the human mean. Define the down-forward coordinate u = (x_forward + y_downward)/sqrt(2) of each landmark. The claim is supported if (a) Spearman rho(u, log J) >= 0.6 with positive sign, (b) the sign of the correlation of log J with x_forward alone and with y_downward alone is positive in both, and (c) an ordinary linear regression of log J on u explains >= 50% of the variance in log J (the \'logarithmic order\' of areas, i.e. geometric progression of area ratio with grid position). Secondary plan (only inter-landmark distances available): log of the ratio of chimpanzee to human mean distance, each distance first divided by the geometric mean of all distances in its specimen; assign each distance by the anatomical names of its endpoints to one of three ordered regions (1 neurocranium/vault/occiput, 2 orbit/upper face/nasal, 3 maxilla/palate/mandible/alveolar); supported if Spearman rho(region rank, log ratio) >= 0.6 and region medians increase monotonically 1 < 2 < 3. If the data also contain Gorilla, the same statistics are reported for Gorilla as a replication but do not enter the verdict. Because baboon (Papio) data could not be located, confidence attached to any verdict is capped at 0.6." } } } rows { name { value: "failCriterion" } } rows { quad { p_iri { } o_literal { lex: "Pre-registered. Refuted if Spearman rho(u, log J) < 0.3 (primary plan) or rho(region rank, log ratio) < 0.3 (secondary plan), or if the correlation of log J with x_forward and with y_downward have opposite signs (expansion forwards but contraction downwards or vice versa), or if the regression of log J on u explains < 25% of the variance while log J differs between anatomical regions in a non-monotone way (patchwork rather than gradient). Results between the pass and fail thresholds are \'mixed\'. If the deposited file contains neither coordinates nor named inter-landmark distances per specimen (e.g. only summary statistics), the verdict is inconclusive with reason data-unavailable." } } } rows { name { value: "hasConfidence" } } rows { datatype { value: "http://www.w3.org/2001/XMLSchema#double" } } rows { quad { p_iri { } o_literal { lex: "0.5" datatype: 1 } } } rows { name { value: "hasEvidence" } } rows { prefix { value: "https://w3id.org/delphi/resource/evidence/" } } rows { name { value: "thompson1917-ch17-16--claim-test--dataset-1" } } rows { quad { p_iri { } o_iri { prefix_id: 14 } } } rows { name { value: "hasVerdict" } } rows { quad { p_iri { prefix_id: 10 } o_literal { lex: "supports" } } } rows { name { value: "hypothesis" } } rows { quad { p_iri { } o_literal { lex: "If the differences between the human skull and the chimpanzee (and baboon) skull form one continuous deformation whose grid areas \'increase in a gradual and approximately logarithmic order\' from above downwards and from behind forwards, then the local area scale factor of the human-to-ape transformation of the lateral (sagittal) skull profile must be a smooth monotone function of antero-inferior position, with its logarithm roughly linear in that position, rather than a patchwork of region-specific changes." } } } rows { name { value: "inferenceMethod" } } rows { quad { p_iri { } o_literal { lex: "The deposit holds per-specimen inter-landmark distances, not coordinates, so the pre-registered secondary plan was run. Each specimen\'s 39 log distances were centred on their mean (log geometric-mean size correction); species means were taken; the log ratio Pan troglodytes / Homo was formed for each distance. Each of the 21 landmarks was assigned to an ordered region of the human skull from its anatomical name (1 neurocranium/vault/cranial base: BR LD AS OPI BA JP APET EAM SP TS KR; 2 orbit/upper face/nasal/zygomatic arch: NA FM ZS ZYGO NSL; 3 maxilla/palate/alveolar: IS PM PNS MT ZI), and each distance scored by the mean of its endpoint ranks. Spearman rho between score and log ratio, medians by region and a bootstrap over specimens (2000 resamples) were computed; Gorilla and Pan paniscus were run as replications that do not enter the verdict." } } } rows { name { value: "passCriterion" } } rows { quad { p_iri { } o_literal { lex: "Pre-registered. Primary plan (landmark coordinates available for Homo sapiens and Pan troglodytes): generalised Procrustes superimposition of all specimens; species mean configurations; projection of the means onto the midsagittal plane (midline landmarks as they are, bilateral landmarks averaged across sides) giving a lateral profile with x = antero-posterior and y = supero-inferior axes defined by the Frankfurt-like orientation of the human mean; fit a 2-D thin-plate spline mapping the human mean to the chimpanzee mean and evaluate its Jacobian determinant J (local area ratio chimpanzee/human) at every landmark of the human mean. Define the down-forward coordinate u = (x_forward + y_downward)/sqrt(2) of each landmark. The claim is supported if (a) Spearman rho(u, log J) >= 0.6 with positive sign, (b) the sign of the correlation of log J with x_forward alone and with y_downward alone is positive in both, and (c) an ordinary linear regression of log J on u explains >= 50% of the variance in log J (the \'logarithmic order\' of areas, i.e. geometric progression of area ratio with grid position). Secondary plan (only inter-landmark distances available): log of the ratio of chimpanzee to human mean distance, each distance first divided by the geometric mean of all distances in its specimen; assign each distance by the anatomical names of its endpoints to one of three ordered regions (1 neurocranium/vault/occiput, 2 orbit/upper face/nasal, 3 maxilla/palate/mandible/alveolar); supported if Spearman rho(region rank, log ratio) >= 0.6 and region medians increase monotonically 1 < 2 < 3. If the data also contain Gorilla, the same statistics are reported for Gorilla as a replication but do not enter the verdict. Because baboon (Papio) data could not be located, confidence attached to any verdict is capped at 0.6." } } } rows { name { value: "preregistered" } } rows { datatype { value: "http://www.w3.org/2001/XMLSchema#boolean" } } rows { quad { p_iri { } o_literal { lex: "false" datatype: 2 } } } rows { prefix { value: "https://w3id.org/delphi/resource/claim/" } } rows { name { value: "thompson1917-ch17-16" } } rows { name { value: "hasAssessment" } } rows { quad { s_iri { prefix_id: 15 } p_iri { prefix_id: 10 } o_iri { prefix_id: 9 name_id: 12 } } } rows { quad { s_iri { prefix_id: 14 name_id: 30 } p_iri { prefix_id: 7 name_id: 13 } o_literal { lex: "39 natural-log inter-landmark cranial distances for 547 adult hominoid crania: Homo sapiens n=50, Pan troglodytes n=96 (three subspecies), Pan paniscus n=40, Gorilla n=110, Pongo n=66, Hylobatidae n=184" } } } rows { name { value: "license" } } rows { quad { p_iri { name_id: 38 } o_literal { lex: "CC0 1.0" } } } rows { name { value: "EvidenceItem" } } rows { quad { p_iri { prefix_id: 4 name_id: 10 } o_iri { prefix_id: 10 name_id: 39 } } } rows { quad { p_iri { prefix_id: 11 name_id: 16 } o_literal { lex: "Dataset: Data from: The evolution of hominoid cranial diversity: a quantitative genetic approach (Schroeder & von Cramon-Taubadel 2017, Evolution)" } } } rows { name { value: "atLocation" } } rows { prefix { value: "https://zenodo.org/api/records/4976293/files/Schroeder,%20von%20Cramon-Taubadel_Evolution2017.xlsx/" } } rows { name { value: "content" } } rows { quad { p_iri { prefix_id: 5 name_id: 40 } o_iri { prefix_id: 16 } } } rows { name { value: "wasDerivedFrom" } } rows { prefix { id: 6 value: "https://zenodo.org/records/" } } rows { name { value: "4976293" } } rows { quad { p_iri { prefix_id: 5 } o_iri { prefix_id: 6 } } } rows { name { value: "hasChecksum" } } rows { quad { p_iri { prefix_id: 10 } o_literal { lex: "sha256:ca809bdfb64f1f92eb6d8dc077d806824a898c45aab7a903429b7a952c7f7ca2" } } } rows { name { value: "SoftwareAgent" } } rows { quad { s_iri { prefix_id: 13 name_id: 20 } p_iri { prefix_id: 4 name_id: 10 } o_iri { prefix_id: 5 name_id: 45 } g_iri { prefix_id: 2 name_id: 7 } } } rows { quad { p_iri { prefix_id: 11 name_id: 16 } o_literal { lex: "delphisci claim tester (claude-fable-5.1; 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