https://w3id.org/np/RAl73v1J6uqKc8hhDba_QNuXUQGEjzP7vreSVlefQFgR0
.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt
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sub:Head {
this: a np:Nanopublication;
np:hasAssertion sub:assertion;
np:hasProvenance sub:provenance;
np:hasPublicationInfo sub:pubinfo .
}
sub:assertion {
<https://w3id.org/delphi/resource/assessment/darwin1859-ch05-07--claim-test> a <https://w3id.org/delphi/ontology/Assessment>;
dc:description "The Dryad version bundle for 10.5061/dryad.c3287 was downloaded and the first row of each sheet was read as headers. Headers were matched to the pre-registered competitor pattern (competitor, competition, enemy, herbivore, biotic, exclusion, neighbor) and fitness pattern, with biotic required as its own token so abiotic would not match. The Mann-Whitney contrast was not run. The performance sheet has no competitor treatment joined to a within-range and beyond-range fitness pair, so the competition clause stays untested.";
<http://www.w3.org/2000/01/rdf-schema#comment> "Measured: null fitness drop beyond the range, competitors present minus absent (n = 0). Interpretation: Darwin's claim is comparative: competition limits ranges at least as much as climate. The only admissible contrast is a transplant table that records competitors or enemies. GlobTherm, WorldClim and GBIF can describe climate and occurrences, and they are not used, because they do not record competitors. 'At least as much' is read as a larger fitness drop beyond the range in the competitor-present treatment than in the competitor-absent treatment. Plants and animals are whatever taxa are in the compilation. One meta-analysis is narrower than all species in nature.";
<http://www.w3.org/2000/01/rdf-schema#label> "Claim test of darwin1859-ch05-07: inconclusive, confidence 0.82";
<http://www.w3.org/2000/01/rdf-schema#seeAlso> <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/darwin-origin/darwin1859-ch05-07/result.json>;
prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7>;
<https://w3id.org/delphi/ontology/admissibleDatasets> "A public table of transplants beyond the geographic range that records fitness and whether competitors or enemies were present. Climate layers and occurrence maps without a competitor field are not admissible for this clause.";
<https://w3id.org/delphi/ontology/assessmentType> "claim-test/0.1.0";
<https://w3id.org/delphi/ontology/dataKind> "none";
<https://w3id.org/delphi/ontology/disconfirmingObservation> "The fitness drop beyond the range is larger where competitors are absent.";
<https://w3id.org/delphi/ontology/evidenceAgainst> "A climate-only within-versus-beyond performance difference was not scored.",
"Amelioration (N, B, BA) and Natural comp? describe whether vegetation or a biotic factor was left in place. Those headers are outside the pre-registered matcher, so they were not used as a treatment after the codebook was read.",
"One 2013 transplant compilation is narrower than all species in nature.", "The competition clause is untested. Headers matching the pre-registered competitor pattern sit on the study sheet (biotic tested, biotic notes, biotic results, abiotic vs biotic, abiotic vs biotic notes). They are study-level flags, notes, and the authors' abiotic-versus-biotic conclusion, not a competitors-present versus competitors-absent label on a fitness pair.",
"The performance sheet stores geographic position as i.I, i.E and i.B. No header on that sheet matches the pre-registered competitor pattern or the pre-registered fitness pattern (fitness, survival, fecundity, lambda, performance).",
"The token biotic inside abiotic was not counted as a competitor header.";
<https://w3id.org/delphi/ontology/expectedObservation> "The within-minus-beyond fitness drop is larger where competitors are present than where they are absent.";
<https://w3id.org/delphi/ontology/failCriterion> "Pre-registered. REFUTES if the same comparison is significant in the opposite direction. Any other completed comparison is mixed. If the workbook has no competitor column, the competition clause is untested and the verdict is inconclusive with reason not-operationalizable. A climate-only fitness difference is not scored as support. If the file cannot be fetched, inconclusive with reason data-unavailable.";
<https://w3id.org/delphi/ontology/hasConfidence> "0.82"^^xsd:double;
<https://w3id.org/delphi/ontology/hasEvidence> <https://w3id.org/delphi/resource/evidence/darwin1859-ch05-07--claim-test--dataset-1>;
<https://w3id.org/delphi/ontology/hasVerdict> "inconclusive";
<https://w3id.org/delphi/ontology/hypothesis> "In beyond-range transplant experiments, the drop in fitness outside the range is at least as large when competitors or enemies are present as when they are absent.";
<https://w3id.org/delphi/ontology/inferenceMethod> "Header match for a competitor column, then a one-sided Mann-Whitney on the fitness drop. If the column is absent, stop. No climate-only substitute.";
<https://w3id.org/delphi/ontology/passCriterion> "Pre-registered. Use the Hargreaves et al. 2013 Dryad workbook of beyond-range transplants. A competitor column is a header matching competitor, competition, enemy, herbivore, biotic, exclusion or neighbor. A fitness column matches fitness, survival, fecundity, lambda or performance. A position column matches beyond, outside, home or within. SUPPORTS only if both a competitor column and a fitness column exist, each treatment has at least 10 rows, and the median fitness drop from within the range to beyond it is larger when competitors are present than when they are absent, one-sided Mann-Whitney p < 0.05. No subsample.";
<https://w3id.org/delphi/ontology/preregistered> "false"^^xsd:boolean .
<https://w3id.org/delphi/resource/claim/darwin1859-ch05-07> <https://w3id.org/delphi/ontology/hasAssessment>
<https://w3id.org/delphi/resource/assessment/darwin1859-ch05-07--claim-test> .
<https://w3id.org/delphi/resource/evidence/darwin1859-ch05-07--claim-test--dataset-1>
a <https://w3id.org/delphi/ontology/EvidenceItem>;
dc:description "beyond-range transplant meta-analysis workbook; competition clause not scored";
dc:license "https://spdx.org/licenses/CC0-1.0.html";
<http://www.w3.org/2000/01/rdf-schema#label> "Dataset: Data from: Are species' range limits simply niche limits writ large? A review of transplant experiments beyond the range";
prov:atLocation <https://datadryad.org/api/v2/datasets/doi:10.5061%2Fdryad.c3287>,
<https://datadryad.org/api/v2/versions/5650>, <https://datadryad.org/api/v2/versions/5650/download>,
<https://datadryad.org/api/v2/versions/5650/files>;
prov:wasDerivedFrom <https://datadryad.org/dataset/doi:10.5061/dryad.c3287>;
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"sha256:e84d70bb3f97e0c4099fe23c02c2e958fc94448958faca321e74eccbb9a2d8d1" .
}
sub:provenance {
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<http://www.w3.org/2000/01/rdf-schema#label> "delphisci claim tester (grok-4.7; cursor/darwin-selection-ranges-2c1e)";
prov:actedOnBehalfOf <https://orcid.org/0009-0007-4948-9192>;
<https://w3id.org/delphi/ontology/usesModel> <https://w3id.org/delphi/resource/model/grok-4-7> .
<https://w3id.org/delphi/resource/model/grok-4-7> a <https://w3id.org/delphi/ontology/LanguageModel>;
dc:identifier "grok-4.7" .
sub:assertion prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7>;
prov:wasDerivedFrom <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/darwin-origin/darwin1859-ch05-07/result.json>;
prov:wasGeneratedBy sub:test .
sub:plan prov:hadPlan <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/README.md> .
sub:test a prov:Activity;
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prov:wasAssociatedWith <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7> .
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sub:pubinfo {
this: dc:created "2026-11-08T16:24:31.810Z"^^xsd:dateTime;
dc:creator <https://orcid.org/0009-0007-4948-9192>;
dc:license <https://creativecommons.org/licenses/by/4.0/>;
npx:hasNanopubType <https://w3id.org/delphi/ontology/Assessment>;
npx:introduces <https://w3id.org/delphi/resource/assessment/darwin1859-ch05-07--claim-test>;
<http://www.w3.org/2000/01/rdf-schema#label> "Claim test of darwin1859-ch05-07: inconclusive, confidence 0.82";
<https://w3id.org/delphi/ontology/domain> <https://w3id.org/delphi/resource/domain/darwin-origin-1859> .
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