https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/Head
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY
http://www.nanopub.org/nschema#hasAssertion
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/assertion
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY
http://www.nanopub.org/nschema#hasProvenance
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/provenance
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY
http://www.nanopub.org/nschema#hasPublicationInfo
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/pubinfo
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
http://www.nanopub.org/nschema#Nanopublication
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/assertion
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
http://purl.org/dc/terms/description
analysis.py fetches each Table S1 SBML file from EBI BioModels and integrates it with scipy BDF (rtol 1e-4, atol 1e-6) using libroadrunner rates, one model per subprocess. Sensitization is a strict 1.5-fold rise of the response mean on all six stimulation epochs; habituation is a strict fall to 1/1.5 or below. A third-node break requires the two following UCS epochs to fail that ratio after two clamps, while the same two epochs without the third-node clamp still satisfy it. Models outside 3–15 floating species are excluded before scoring. decide() returns inconclusive/underpowered when fewer than 8 completed models sensitize or fewer than 8 habituate. After the screen, --redecide reapplied decide() to the saved per-model rows and wrote those counts into derived/measured.json without integrating again.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
https://w3id.org/delphi/ontology/Assessment
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
http://www.w3.org/2000/01/rdf-schema#comment
Measured: 2 completed models with at least one sensitizing stimulus–response pair (n = 26, deterministic given the SBML bytes, the BDF tolerances, and the pre-registered epoch rules; per-model wall time is not a measurement). Interpretation: The claim is a simulation result about the 27 sensitizing ODE pathway models in the Biswas, Clawson and Levin survey, not a statement that cells break sensitization less readily than habituation. Sensitization and habituation are the paper's ratio rules (Methods 4.5 and 4.6): six successive stimulation epochs must each move the response mean by a factor of 1.5. A third-node break is the failure of that ratio on two UCS test epochs after the third node is clamped twice. Therapeutic wording in the claim is not given a separate measurement. Clamp levels are 100 times the nonzero maximum (up) or the nonzero minimum divided by 100 (down), taken from an unforced trajectory, matching USscaleUp = 100 in Find_DrugRes_Sensitize_SLURM1.m of https://github.com/wesleypclawson/GRN_ODE. Epoch boundaries in time units are the MATLAB call-index boundaries times 0.1 (each ode23tb call in that script advances 0.1 time): relax 0–500, then stimulation windows [500,1000], [1600,2200], [2900,3600], [4400,5200], [6100,7000], [8000,9000], with the gaps as relaxations. Breaking epochs last 100 time units, which is simCnt = 10000 samples at h = 0.01 in stimulateRelaxSingle.m. One adaptive integration per epoch with the clamped species held fixed is the continuous-clamp limit of their per-step reset; that substitution is part of this registration, not a later deviation. Means are arithmetic means of 21 evenly spaced samples on each epoch.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
http://www.w3.org/2000/01/rdf-schema#label
Claim test of levin-2022-grn-learning-18: inconclusive, confidence 0.85
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
http://www.w3.org/2000/01/rdf-schema#seeAlso
https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/levin-papers/levin-2022-grn-learning-18/result.json
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
http://www.w3.org/ns/prov#wasAttributedTo
https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/admissibleDatasets
The pathway models whose BioModels identifiers are listed in Table S1 of Biswas, Clawson and Levin, Int. J. Mol. Sci. 2023, 24, 285 (supplement ijms-24-00285-s001), simulated from the public SBML with topology and parameters left at the deposited values. Generated random gene circuits do not count for this claim. Models with fewer than 3 or more than 15 floating species are outside the pre-registered computational bound and are excluded before scoring.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/assessmentType
claim-test/0.1.0
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/dataKind
computational
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/disconfirmingObservation
A sensitization-break rate of at least half the sensitizing models, a break in 5% or more of pairs in most models, or a sensitization-break rate at least as high as the habituation-break rate.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/evidenceAgainst
A simulation of deposited pathway models does not show that cells break sensitization less readily than habituation.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/evidenceAgainst
BIOMD0000000001 had 184 sensitizing pairs and BIOMD0000000002 had 199, with no break in either model. Those pair counts did not enter a rate test, because S is below 8.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/evidenceAgainst
Each epoch is one adaptive integration with the clamped species held fixed, the continuous-clamp limit of the MATLAB per-step reset. libroadrunner getRatesOfChange does not fire SBML events. Models whose species are fixed by an assignment rule (BIOMD0000000016, BIOMD0000000275) and the delay model BIOMD0000000024 could not be clamped and were excluded.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/evidenceAgainst
The pre-registered power floor was not met: S = 2 sensitizing models and H = 5 habituating models, both below 8, among 26 completed size-eligible models (5 of 31 size-eligible models failed to integrate). The comparison with 8 of 27, with a break in under 5% of pairs, and with the habituation-break rate was not applied. The verdict is inconclusive. It is not support and it is not a refutation.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/evidenceAgainst
The published MATLAB counter uses nonzeros and range and can ignore epochs that do not move by a factor of 1.5. This test follows the methods prose: all six epochs, with a strict rise or fall. That choice was registered before scoring and can classify fewer models as sensitizing than the MATLAB counter.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/evidenceAgainst
Therapeutic wording in the claim was not given a separate measurement.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/expectedObservation
Among surveyed pathway ODEs that sensitize under the six-epoch 1.5-fold rule, only a minority (rate between 0.15 and 0.45) have any third-node clamp that stops the 1.5-fold rise, most of those models break fewer than 5% of their sensitizing pairs, and the habituation-break rate is higher.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/failCriterion
Pre-registered. Refutes if and only if S >= 8, H >= 8, and at least one of: Sb/S >= 0.50, mostly_under_5 < 0.25, or Hb/H <= Sb/S. If S >= 8 and H >= 8 but neither the pass nor the fail rule holds, the verdict is mixed. If the Table S1 identifier list or the SBML files cannot be retrieved, or no ODE engine can be imported, the verdict is inconclusive with reason data-unavailable. If S < 8 or H < 8, or more than half of the size-eligible models fail to integrate or exceed the per-model time limit, the verdict is inconclusive with reason underpowered.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/hasConfidence
0.85
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/hasEvidence
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-1
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/hasEvidence
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/hasVerdict
inconclusive
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/hypothesis
If the published claim holds for the surveyed BioModels pathway ODEs, a third-node clamp breaks sensitization in only a minority of the sensitizing models (about 8 of 27), most of those models have a break in fewer than 5% of their sensitizing stimulus–response pairs, and sensitization is broken in a smaller fraction of models than habituation is.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/inferenceMethod
Each ordered pair of distinct floating species is clamped up and down across six lengthening epochs. Sensitization is a 1.5-fold rise of the response mean on every successive stimulation epoch; habituation is a fall to 1/1.5 or below on every successive epoch. A pair is breakable if any other species, clamped up or down for two epochs, makes the two following UCS epochs fail that same ratio. Model rates Sb/S and Hb/H and the per-model pair fractions are compared with the fixed thresholds in pass_criterion and fail_criterion. No assessor score is used.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/passCriterion
Pre-registered. Let S be the completed models with at least one sensitizing UCS–R pair and Sb the subset in which at least one such pair is breakable by a third node. Let H and Hb be the same for habituation. Let mostly_under_5 be the fraction of models in S whose (breakable sensitizing pairs)/(sensitizing pairs) is strictly below 0.05. Supports if and only if S >= 8, H >= 8, 0.15 <= Sb/S <= 0.45, mostly_under_5 >= 0.50, and Hb/H > Sb/S.
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/ontology/preregistered
false
https://w3id.org/delphi/resource/claim/levin-2022-grn-learning-18
https://w3id.org/delphi/ontology/hasAssessment
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-1
http://purl.org/dc/terms/description
Table S1 lists the BioModels identifiers in the surveyed pathway set. The zip is not committed (over 1 MB). Result figures in the supplement were not used as measurements.
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-1
http://purl.org/dc/terms/license
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-1
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
https://w3id.org/delphi/ontology/EvidenceItem
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-1
http://www.w3.org/2000/01/rdf-schema#label
Dataset: Biswas, Clawson and Levin, Int. J. Mol. Sci. 2023, 24, 285, supplement ijms-24-00285-s001, Table S1 model identifiers
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-1
http://www.w3.org/ns/prov#atLocation
https://mdpi-res.com/d_attachment/ijms/ijms-24-00285/article_deploy/ijms-24-00285-s001.zip?version=1672829351
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-1
http://www.w3.org/ns/prov#wasDerivedFrom
https://www.mdpi.com/1422-0067/24/1/285
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-1
https://w3id.org/delphi/ontology/hasChecksum
sha256:292a7f33bcb3a9589614507114de8c1a7a5f5d8bc11e382d546c3d08da381e39
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://purl.org/dc/terms/description
Deposited pathway ODEs. Trajectories were generated from these files; the authors' .mat result files were not opened.
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://purl.org/dc/terms/license
CC0 1.0 on files whose SBML text contains CC0; otherwise unstated in the file
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
https://w3id.org/delphi/ontology/EvidenceItem
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/2000/01/rdf-schema#label
Dataset: EBI BioModels SBML for the Table S1 identifiers
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000001?filename=BIOMD0000000001_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000002?filename=BIOMD0000000002_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000003?filename=BIOMD0000000003_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000004?filename=BIOMD0000000004_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000005?filename=BIOMD0000000005_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000006?filename=BIOMD0000000006_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000010?filename=BIOMD0000000010_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000016?filename=BIOMD0000000016_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000017?filename=BIOMD0000000017_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000021?filename=BIOMD0000000021_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000022?filename=BIOMD0000000022_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000023?filename=BIOMD0000000023_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000024?filename=BIOMD0000000024_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000026?filename=BIOMD0000000026_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000027?filename=BIOMD0000000027_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000029?filename=BIOMD0000000029_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000031?filename=BIOMD0000000031_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000035?filename=BIOMD0000000035_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000036?filename=BIOMD0000000036_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000037?filename=BIOMD0000000037_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000038?filename=BIOMD0000000038_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000039?filename=BIOMD0000000039_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000050?filename=BIOMD0000000050_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000069?filename=BIOMD0000000069_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000203?filename=BIOMD0000000203_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000204?filename=BIOMD0000000204_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000209?filename=BIOMD0000000209_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000210?filename=BIOMD0000000210_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000275?filename=BIOMD0000000275_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000483?filename=BIOMD0000000483_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000539?filename=BIOMD0000000539_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000600?filename=BIOMD0000000600_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000631?filename=BIOMD0000000631_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000664?filename=BIOMD0000000664_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#atLocation
https://www.ebi.ac.uk/biomodels/model/download/BIOMD0000000697?filename=BIOMD0000000697_url.xml
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
http://www.w3.org/ns/prov#wasDerivedFrom
https://www.ebi.ac.uk/biomodels/
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:02376379c0270208b2fd72529a50ccefcdd68c8b23a40585bfdcdd0926a4c8da
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:0b569c675eaed0226dc4c1dcd7f7e2e210a7cbd1b5562da97e55f47c255cdf04
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:0f6d241fdf1e0ffd46fbb0f203c0b83c135e23c6bb0ae81d3dfad7fd4a9c1827
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:1a6b8afba805b78e72f3b825626f4b10d1ce3cd92e3feab1d29781822ec2d4cf
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:2a8f7a68ac7efd45e09f42a1a5f5e30c9a47b9c039fb79ecf86ef7e3def17c07
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:3303169fdd9a672fa25c26586822c9a1b91ac461744d1926d317f493e6981237
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:33708cec1fad44db6958c3ac6255397ad79b45564a296d29732fd934608d787b
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:35ad538383991b45273e2a767c0325d996d188dba10ce959de9635564813f703
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:382a22cca6d338f7f614406343cd86189d30370ec98ee49df22310b32566b538
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:407fccc883f80e6d120e34d8b0810a206a5cc6535a26d4574611504e683beb08
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:4846396a6621661b5faa775f7f7b48aefe36c3396bb2da41aeb96f3319d084ad
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:49fa7d62694291db1d001a1c8c0a77c3f2c183e6def7d352b57a9714c542be33
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:504dc54b5697b4183bd0046fb11f0991702961e3dee0baf15ac1ecaad5009eb6
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:50f2d7cf4cd14c4c1953ef8ae07a3efe35cea2af7e84baf5ab35ad188fa23406
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:56d8acc83add5a262b6785b18f2e905e606b9072625e25ba1520306bc4d586bb
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:56ddd4cc0a0cf51c55a27fa386e0ee670c798ea69151ad39fadf363d0c0297a1
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:5a4f44b5a0bc8f32d3206f460f748236539de593be0fb016da2ed7cddd098e36
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:600e2c173146c24f77c738c9117aa684a0acf9aeedea227126efaf033f641e70
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:6b221222be03747b11454cc4f2a6218697d9c6367d3578a170c7cc5c34ad3b12
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:748514f402eea94c49346701a30f2b429c9c7d5de922cd450e5a155d5f69dbe1
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:7f7ee585a886f9cd88199887a9e674e070ce368b2884ceeee65dd437f3edca7f
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:906964e07ffd570ad94a03c1222e230b54b913cd536b008392bfb6155930a966
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:a633872e4c602922e85ac487ef52ac8bd8ead762ec7c0f86f9e93032a84c90f5
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:a688c8883b5d3913348766830d109a9a83b378e03735eb9f59139484463bfb72
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:ac4f36293662123205a8d5f9f1346982d9e020abd095d9df5765ea7641ef4713
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:b527328fbc3d8c57f41bc15615c115f156c2ae80d6a7f3ef0be069cad3a84df2
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:b75db9f5e0b418d7eb015e44565c992ebcda10f56f8934747a2677e222b16148
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:c1eb117678b7d423b8e1d2fd7f493c865fb66559980256f3544938f5a431b530
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:c3cd0b2dfc738565fe72be3208eec28023e623297e198015df1df77a7e430820
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:c95e89456a74ebf7bbef76e648ac4e83f59a913b894b01a69387458ae77802f4
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:d293eb11fdd65b3150999c68edaf690a9449ea9e070a8f61878b3a4648eff7c5
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:dccd31fe46f4fb06484a9e3b95718aad788692e9abad1dc68fd368d7c8247066
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:ea0689f4ed3342219eaf79d7f9c1058a5f51a0cec417d47fd22e9b7aa6ab1518
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:fa698cc484dd1b46bb80aff07609a4c50a933c5e6f88cdbef79c61c927215dec
https://w3id.org/delphi/resource/evidence/levin-2022-grn-learning-18--claim-test--dataset-2
https://w3id.org/delphi/ontology/hasChecksum
sha256:fd4669b73014455d7d0ae1c6099000e3055999436080ca247aae381688bba14f
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/provenance
https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
http://www.w3.org/ns/prov#SoftwareAgent
https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7
http://www.w3.org/2000/01/rdf-schema#label
delphisci claim tester (Grok 4.7; cursor/test-levin-grn-learning-5674)
https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7
http://www.w3.org/ns/prov#actedOnBehalfOf
https://orcid.org/0009-0007-4948-9192
https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7
https://w3id.org/delphi/ontology/usesModel
https://w3id.org/delphi/resource/model/grok-4-7
https://w3id.org/delphi/resource/model/grok-4-7
http://purl.org/dc/terms/identifier
Grok 4.7
https://w3id.org/delphi/resource/model/grok-4-7
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
https://w3id.org/delphi/ontology/LanguageModel
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/assertion
http://www.w3.org/ns/prov#wasAttributedTo
https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/assertion
http://www.w3.org/ns/prov#wasDerivedFrom
https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/levin-papers/levin-2022-grn-learning-18/result.json
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/assertion
http://www.w3.org/ns/prov#wasGeneratedBy
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/test
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/plan
http://www.w3.org/ns/prov#hadPlan
https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/README.md
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/test
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
http://www.w3.org/ns/prov#Activity
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/test
http://www.w3.org/ns/prov#qualifiedAssociation
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/plan
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/test
http://www.w3.org/ns/prov#wasAssociatedWith
https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/pubinfo
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY
http://purl.org/dc/terms/created
2026-11-08T16:24:31.877Z
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY
http://purl.org/dc/terms/creator
https://orcid.org/0009-0007-4948-9192
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY
http://purl.org/dc/terms/license
https://creativecommons.org/licenses/by/4.0/
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY
http://purl.org/nanopub/x/hasNanopubType
https://w3id.org/delphi/ontology/Assessment
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY
http://purl.org/nanopub/x/introduces
https://w3id.org/delphi/resource/assessment/levin-2022-grn-learning-18--claim-test
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY
http://www.w3.org/2000/01/rdf-schema#label
Claim test of levin-2022-grn-learning-18: inconclusive, confidence 0.85
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY
https://w3id.org/delphi/ontology/domain
https://w3id.org/delphi/resource/domain/levin-papers
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/sig
http://purl.org/nanopub/x/hasAlgorithm
RSA
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/sig
http://purl.org/nanopub/x/hasPublicKey
MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAyFHtPB6p0mCjDozxlOY9CmO3nBm7Te3jFbXyLmM+G1tGe47Da0jYIbhkl9Oo1ZjxmCa3LCwlEqK8gj6hEIcL4ahW30JXh9HycfKVk1bugkzMEV15tJdTzAU3sGMFnbNsn43xY2LFLy45tApkRm5byEiM7oRRrooIdwoQKnP4Wzq/bfAoJ9qvW+MGkelyOTd1jbSt+KfmT7xKmDfWzAHddUlWwMX2QJOLxDaffOteTop6ZRgPiNmPJKA/S62Gac9XtSYT3oDkZ6/nr5cxxNLpOyxTf5FPISiCe11xYO/unYjY+mwnOfA8yhJIyx1l0O9I0vpOpn+E5TvyHJV+oSTrvwIDAQAB
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/sig
http://purl.org/nanopub/x/hasSignature
Fz3B6vNAHU/kuFovpbtTztjvgJC99XLTOuqMDbcw763wa1QDEqQqJF0GN2GYM6H6e4idr4ykYn/h4WjdkCcc1wn8LXJbIY6NwUXhTMsyeHxrzJDZkHzV7WO8pEEHwYuUsZJWJT0gnvFD+53GZcOobhq6uPJXzgr4iKRi29oEAMpHrzsMqoy3R/+pgahhvMRYZpHZ27cFPewIXoDLYZZvLDhm1lSx1gb8/19eSfnm8tagXE0Yphm1nwqCXYmyvVe+bsHqbY1uZBZIdjUfFIa140Iv1CHFTUCWD4LEq0yIBzaTgI9TIoiMxkov7Su8lyGk9jq4+WfYM6hpk7fRv/jhSQ==
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/sig
http://purl.org/nanopub/x/hasSignatureTarget
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY
https://w3id.org/np/RAcFgdhbV5yabPEu0w0KWiDgiBd3v3tBBJMCiWAUJcaJY/sig
http://purl.org/nanopub/x/signedBy
https://orcid.org/0009-0007-4948-9192