https://w3id.org/np/RAb4SkWPp4KIjRRSBJCVjOq4WFWX9wRLIDXTmhEC4skAY
.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt
@prefix this: <https://w3id.org/np/RAb4SkWPp4KIjRRSBJCVjOq4WFWX9wRLIDXTmhEC4skAY> .
@prefix sub: <https://w3id.org/np/RAb4SkWPp4KIjRRSBJCVjOq4WFWX9wRLIDXTmhEC4skAY/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix dc: <http://purl.org/dc/terms/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
sub:Head {
this: a np:Nanopublication;
np:hasAssertion sub:assertion;
np:hasProvenance sub:provenance;
np:hasPublicationInfo sub:pubinfo .
}
sub:assertion {
<https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>
a prov:SoftwareAgent;
<http://www.w3.org/2000/01/rdf-schema#label> "delphisci dataset-resolvability assessor (GPT-5.6 Sol)";
prov:actedOnBehalfOf <https://orcid.org/0009-0007-4948-9192>;
<https://w3id.org/delphi/ontology/usesModel> <https://w3id.org/delphi/resource/model/gpt-5.6-sol-medium> .
<https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt>
a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
dc:description "The model and observables support direct quantitative model comparison using existing force curves. However, open raw measurements are not known to be harmonized, coverage across beta-sheet domain classes is limited, and parameter flexibility reduces discrimination from other explanations.";
dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0>;
<http://www.w3.org/2000/01/rdf-schema#comment> "Proposed test with existing data: Fit the two-parameter model to independent force-extension curves for beta-sheet domains and compare held-out residuals and predictive performance with the ideal worm-like-chain model and plausible richer alternatives. Support requires the same physically plausible hydrogen-bond energy and persistence-length parameters to explain breakdown across domains; systematic failure or a need for additional domain-specific parameters refutes the stated generality.";
<http://www.w3.org/2000/01/rdf-schema#label> "GPT-5.6 Sol on buehler-2008-entropic-limit-01: partially-resolvable, resolvability 0.57";
prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
<https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0";
<https://w3id.org/delphi/ontology/evidenceAgainst> "Instrument compliance, pulling rate, and construct geometry differ among studies.",
"Raw force-extension curves are scattered and may be available only as figures.",
"Two fitted parameters may mimic deviations caused by intermediates or nonequilibrium effects.";
<https://w3id.org/delphi/ontology/hasConfidence> "0.68"^^xsd:double;
<https://w3id.org/delphi/ontology/hasEvidence> <https://w3id.org/delphi/resource/evidence/buehler-2008-entropic-limit-01--gpt--dataset-1>;
<https://w3id.org/delphi/ontology/hasScore> "0.571"^^xsd:double;
<https://w3id.org/delphi/ontology/hasVerdict> "partially-resolvable" .
<https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt--analysis-feasibility>
a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
dc:isPartOf <https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt>;
dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-analysis-feasibility>;
<http://www.w3.org/2000/01/rdf-schema#label> "Analysis feasibility of buehler-2008-entropic-limit-01 by GPT-5.6 Sol: 0.64";
prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
<https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0/analysis-feasibility";
<https://w3id.org/delphi/ontology/hasScore> "0.64"^^xsd:double .
<https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt--data-adequacy>
a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
dc:isPartOf <https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt>;
dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-data-adequacy>;
<http://www.w3.org/2000/01/rdf-schema#label> "Data adequacy of buehler-2008-entropic-limit-01 by GPT-5.6 Sol: 0.38";
prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
<https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0/data-adequacy";
<https://w3id.org/delphi/ontology/hasScore> "0.38"^^xsd:double .
<https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt--data-existence>
a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
dc:isPartOf <https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt>;
dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-data-existence>;
<http://www.w3.org/2000/01/rdf-schema#label> "Data existence of buehler-2008-entropic-limit-01 by GPT-5.6 Sol: 0.46";
prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
<https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0/data-existence";
<https://w3id.org/delphi/ontology/hasScore> "0.46"^^xsd:double .
<https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt--discriminating-power>
a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
dc:isPartOf <https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt>;
dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-discriminating-power>;
<http://www.w3.org/2000/01/rdf-schema#label> "Discriminating power of buehler-2008-entropic-limit-01 by GPT-5.6 Sol: 0.58";
prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
<https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0/discriminating-power";
<https://w3id.org/delphi/ontology/hasScore> "0.58"^^xsd:double .
<https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt--operationalizability>
a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
dc:isPartOf <https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt>;
dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-operationalizability>;
<http://www.w3.org/2000/01/rdf-schema#label> "Operationalizability of buehler-2008-entropic-limit-01 by GPT-5.6 Sol: 0.84";
prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
<https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0/operationalizability";
<https://w3id.org/delphi/ontology/hasScore> "0.84"^^xsd:double .
<https://w3id.org/delphi/resource/claim/buehler-2008-entropic-limit-01> <https://w3id.org/delphi/ontology/hasAssessment>
<https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt>,
<https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt--analysis-feasibility>,
<https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt--data-adequacy>,
<https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt--data-existence>,
<https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt--discriminating-power>,
<https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt--operationalizability> .
<https://w3id.org/delphi/resource/evidence/buehler-2008-entropic-limit-01--gpt--dataset-1>
a <https://w3id.org/delphi/ontology/EvidenceItem>;
dc:description "repository to locate public single-molecule force-spectroscopy datasets and supplements";
<http://www.w3.org/2000/01/rdf-schema#label> "Candidate dataset: BioStudies";
prov:wasDerivedFrom <https://www.ebi.ac.uk/biostudies/> .
<https://w3id.org/delphi/resource/model/gpt-5.6-sol-medium> a <https://w3id.org/delphi/ontology/LanguageModel>;
dc:identifier "gpt-5.6-sol-medium";
<http://www.w3.org/2000/01/rdf-schema#label> "GPT-5.6 Sol" .
}
sub:provenance {
sub:assertion prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium>;
prov:wasDerivedFrom <https://github.com/fractastical/delphisci/blob/67fe5b156cfeca15a2ded33e0face4177d03101c/claim-sources/buehler-protein-materials/assessment/raw/gpt/batch-1.json>,
<https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0>;
prov:wasGeneratedBy sub:assessment .
sub:assessment a prov:Activity;
prov:qualifiedAssociation sub:assessmentPlan;
prov:wasAssociatedWith <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium> .
sub:assessmentPlan prov:hadPlan <https://github.com/fractastical/delphisci/blob/67fe5b156cfeca15a2ded33e0face4177d03101c/claim-sources/buehler-protein-materials/README.md> .
}
sub:pubinfo {
<https://w3id.org/delphi/resource/domain/buehler-protein-materials> <http://www.w3.org/2000/01/rdf-schema#label>
"buehler-protein-materials" .
this: dc:created "2026-11-08T04:48:50.317Z"^^xsd:dateTime;
dc:creator <https://orcid.org/0009-0007-4948-9192>;
dc:license <https://creativecommons.org/licenses/by/4.0/>;
npx:hasNanopubType <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
npx:introduces <https://w3id.org/delphi/resource/assessment/buehler-2008-entropic-limit-01--gpt>;
<http://www.w3.org/2000/01/rdf-schema#label> "GPT-5.6 Sol on buehler-2008-entropic-limit-01: partially-resolvable, resolvability 0.57";
<https://w3id.org/delphi/ontology/domain> <https://w3id.org/delphi/resource/domain/buehler-protein-materials> .
sub:sig npx:hasAlgorithm "RSA";
npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAyFHtPB6p0mCjDozxlOY9CmO3nBm7Te3jFbXyLmM+G1tGe47Da0jYIbhkl9Oo1ZjxmCa3LCwlEqK8gj6hEIcL4ahW30JXh9HycfKVk1bugkzMEV15tJdTzAU3sGMFnbNsn43xY2LFLy45tApkRm5byEiM7oRRrooIdwoQKnP4Wzq/bfAoJ9qvW+MGkelyOTd1jbSt+KfmT7xKmDfWzAHddUlWwMX2QJOLxDaffOteTop6ZRgPiNmPJKA/S62Gac9XtSYT3oDkZ6/nr5cxxNLpOyxTf5FPISiCe11xYO/unYjY+mwnOfA8yhJIyx1l0O9I0vpOpn+E5TvyHJV+oSTrvwIDAQAB";
npx:hasSignature "cCOm/s0zzfCCn2yUs5Qa0PbWaNzS9mbScn1LD1g+Q4T3fLzN+3vSZTl9VQpSmevl7n1R7ULI1MVPD3zD83L8erPI58JRj38Fi7imQln6kuoZk23jYZYIPhmKdrwutHDkHtA/fSw2432XM4JXuHrRUuQg0SuXN2cyIJ9lXj6QzD1Fp6kVXnMdU61IDwEaqH6cdfM6S3fHh/EzpzPTji9UiAxiOKt/X67XIRpeDMm/zcjCqshBNFsda6xRGSjWFBb/3L1lGtSfbbyTihd7g4SyUrXB4F9K5AVu5ekLGQ1ojqVIISlGMHSVKFhKMZA7YKpFmrjhhSVQSR+KBBkF7RLlEQ==";
npx:hasSignatureTarget this:;
npx:signedBy <https://orcid.org/0009-0007-4948-9192> .
}