Nanopublication

< Home

ID

https://w3id.org/np/RAXf62-X7mSPf2NeVq0q-BL97HwFqPv5zQC-Z_OgLZ7q0

Formats

.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt

Content

@prefix this: <https://w3id.org/np/RAXf62-X7mSPf2NeVq0q-BL97HwFqPv5zQC-Z_OgLZ7q0> .
@prefix sub: <https://w3id.org/np/RAXf62-X7mSPf2NeVq0q-BL97HwFqPv5zQC-Z_OgLZ7q0/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix dc: <http://purl.org/dc/terms/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  <https://w3id.org/delphi/resource/assessment/aristotle-ha01-14--claim-test> a <https://w3id.org/delphi/ontology/Assessment>;
    dc:description "Retrieved 17 Animal Diversity Web accounts from the pre-registered list. Eye sentences were coded with the frozen patterns for subcutaneous eyes, blindness, light detection, functional external eyes, and the comparator eyeless pattern. Mole-rat pages were not used as uniqueness counterexamples.";
    <http://www.w3.org/2000/01/rdf-schema#comment> "Measured: 2 comparator accounts matching the eyeless pattern (n = 13). Interpretation: The scope names Mediterranean moles, Talpa, and possibly mole-rats, Spalax. Talpa europaea is the primary subject. Mole-rat accounts are reported as the alternative identification and are not used to break the uniqueness clause. Uniqueness is tested only against the other pre-registered fossorial live-bearing mammals, not against every mammal, so a pass would be a pass on that list. Live-bearing is the modern reading of viviparous; every species on the list is a mammal and live-bearing.";
    <http://www.w3.org/2000/01/rdf-schema#label> "Claim test of aristotle-ha01-14: inconclusive, confidence 0.4";
    <http://www.w3.org/2000/01/rdf-schema#seeAlso> <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-ha01-14/result.json>;
    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7>;
    <https://w3id.org/delphi/ontology/admissibleDatasets> "Animal Diversity Web species accounts for Talpa europaea, Talpa occidentalis, Talpa romana, Nannospalax ehrenbergi, Notoryctes typhlops, Chrysochloris asiatica, Eremitalpa granti, Heterocephalus glaber, Cryptomys hottentotus, Fukomys damarensis, Geomys bursarius, Thomomys bottae, Scalopus aquaticus, Condylura cristata, Parascalops breweri, Scapanus townsendii and Mogera wogura. Unresolved pages are dropped. The comparator set is every retrieved account outside Talpa, Nannospalax and Spalax.";
    <https://w3id.org/delphi/ontology/assessmentType> "claim-test/0.1.0";
    <https://w3id.org/delphi/ontology/dataKind> "biological";
    <https://w3id.org/delphi/ontology/disconfirmingObservation> "Talpa eyes described as functional and external, or Talpa described as having no eye remnant, or another fossorial mammal on the comparator list described as blind or eyeless while Talpa matches the hidden-eye description.";
    <https://w3id.org/delphi/ontology/evidenceAgainst> "European mole eye sentences that the frozen patterns did not code: They have fully developed eyes that are small and often hidden by fur and no external ears. | Fur starts to grow at 14 days, and eyes begin to open at 22 days.",
      "Spalax or Nannospalax is the alternative identification of Aristotle's mole and is reported separately.",
      "The codes are the pre-registered sentence patterns. A sentence that mentions eyes but does not match those patterns does not change the verdict. Every kept eye sentence is in derived/sentences.json.",
      "These are compiled species accounts, not new dissections.", "Uniqueness is tested only on the pre-registered fossorial list. A pass would not show that no other mammal on earth lacks eyes.";
    <https://w3id.org/delphi/ontology/expectedObservation> "Talpa europaea is described as blind, with eyes present but hidden under skin or otherwise reduced, and none of the other fossorial live-bearing mammals on the list is described as blind or eyeless.";
    <https://w3id.org/delphi/ontology/failCriterion> "Pre-registered. Refute if Talpa europaea matches the externally-functional pattern, or if its eye sentences say the eyes are absent and it does not match the subcutaneous-eye pattern. Mixed if Talpa matches the subcutaneous-eye pattern and either it matches the light-detection pattern or at least one comparator matches the eyeless pattern. Inconclusive with reason data-unavailable if the Talpa europaea account cannot be retrieved. Inconclusive with reason other if that account has no eye, vision, blind or sight sentence. Patterns, case insensitive: subcutaneous = eyes within 60 characters of beneath, under, below, covered by or hidden and skin, or skin within 40 characters of covering an eye, or eyelids fused or sealed, or vestigial, rudimentary, reduced, degenerate or microscopic within 40 characters of eyes. Externally functional = well-developed, prominent or functional eyes, or acute, good or excellent vision. Blind = the word blind, cannot see, unable to see, or no external eyes. Light detection = detect light, light sensitive, distinguish light, or not completely blind. Comparator eyeless = blind, eyes covered or buried or under skin, eyes absent or missing or lacking or vestigial or degenerate, no eyes, or eyelids fused. Small eyes alone do not count.";
    <https://w3id.org/delphi/ontology/hasConfidence> "0.4"^^xsd:double;
    <https://w3id.org/delphi/ontology/hasEvidence> <https://w3id.org/delphi/resource/evidence/aristotle-ha01-14--claim-test--dataset-1>;
    <https://w3id.org/delphi/ontology/hasVerdict> "inconclusive";
    <https://w3id.org/delphi/ontology/hypothesis> "If Aristotle's mole has only hidden, stunted eyes under the skin and is the only live-bearing animal in that condition, then Talpa accounts will describe subcutaneous reduced eyes and no other pre-registered fossorial mammal will.";
    <https://w3id.org/delphi/ontology/inferenceMethod> "Apply the pre-registered sentence patterns to each retrieved account. The verdict follows the pass and fail rules in that order: unavailable or no eye text, then refute, then support, then mixed.";
    <https://w3id.org/delphi/ontology/passCriterion> "Pre-registered. Support only if the Talpa europaea account matches the subcutaneous-eye pattern, does not match the externally-functional pattern, matches the blind pattern, does not match the light-detection pattern, at least 5 comparator accounts were retrieved, and no comparator matches the eyeless pattern. Other Talpa pages are part of the subject, not comparators. Nannospalax and Spalax are an alternative identification of the mole and are reported separately, not as uniqueness counterexamples.";
    <https://w3id.org/delphi/ontology/preregistered> "false"^^xsd:boolean .
  
  <https://w3id.org/delphi/resource/claim/aristotle-ha01-14> <https://w3id.org/delphi/ontology/hasAssessment>
      <https://w3id.org/delphi/resource/assessment/aristotle-ha01-14--claim-test> .
  
  <https://w3id.org/delphi/resource/evidence/aristotle-ha01-14--claim-test--dataset-1>
    a <https://w3id.org/delphi/ontology/EvidenceItem>;
    dc:description "eye descriptions for Talpa europaea and the pre-registered fossorial mammals";
    dc:license "Animal Diversity Web account license as stated on the site";
    <http://www.w3.org/2000/01/rdf-schema#comment> "Location (not a URL): https://animaldiversity.org/accounts/<species>/";
    <http://www.w3.org/2000/01/rdf-schema#label> "Dataset: Animal Diversity Web species accounts";
    prov:atLocation <https://animaldiversity.org/accounts/Chrysochloris_asiatica/>, <https://animaldiversity.org/accounts/Condylura_cristata/>,
      <https://animaldiversity.org/accounts/Cryptomys_hottentotus/>, <https://animaldiversity.org/accounts/Eremitalpa_granti/>,
      <https://animaldiversity.org/accounts/Fukomys_damarensis/>, <https://animaldiversity.org/accounts/Geomys_bursarius/>,
      <https://animaldiversity.org/accounts/Heterocephalus_glaber/>, <https://animaldiversity.org/accounts/Nannospalax_ehrenbergi/>,
      <https://animaldiversity.org/accounts/Notoryctes_typhlops/>, <https://animaldiversity.org/accounts/Parascalops_breweri/>,
      <https://animaldiversity.org/accounts/Scalopus_aquaticus/>, <https://animaldiversity.org/accounts/Scapanus_townsendii/>,
      <https://animaldiversity.org/accounts/Talpa_europaea/>, <https://animaldiversity.org/accounts/Thomomys_bottae/>;
    prov:wasDerivedFrom <https://animaldiversity.org/>;
    <https://w3id.org/delphi/ontology/hasChecksum> "sha256:0009bbd1e20552108a04c71b2f6b4337d09f0c32a1ad36d285949c369e2760b9",
      "sha256:07a942b32b2d348ea7e9dd7572b9d3d232f365be6b7f1a5e3c70392a02dcf98e", "sha256:07fa348be2f2a6a9fccfcda8a643fbc18eb863de7ffb5da762463390e1939654",
      "sha256:11b1f07aea20179408d29bd4d068c90a8c35e0bb0bb1d137ca2d0d31a98dd9ea", "sha256:41ae464b4156297eaee0d272eae11785ee09594bd802d2c30306d50d3d525163",
      "sha256:4c96dc68925e0d333518767b8a3ec9caba24e96581a971f7b02854072ff33e10", "sha256:89bd5502ae0fd07c185b6f0a664c6cfc016e0609b6c6bbdadfe7855ad1c9e41d",
      "sha256:be989752d1e99f469dfaa7ba0d83dcb32205a4195795427d067c9a66cbaaf728", "sha256:c76df56aa45d796f21e45fecc8da331593cb154372de1349a0b18555e720f756",
      "sha256:ce8403a3205575b845e9b7972f613a5835672bdb000ad7c3412c3242f49ae8b7", "sha256:e1c9b72c9868b1bd3157d38e187c76063e436582b83f2f74e4b056d86a13756b",
      "sha256:e5a6a0f2c5aa9afd8516e833c7b1afad63def988dd558a0c0c336fc506fe69ea", "sha256:ed4ea837b540ae3a08339bffc90f7f603613923bb11b0865c6a4acd1379679f4",
      "sha256:f39ac34cca007aec1f9bcde9ef77ad2be3461e0b88683726fd9c8f15f3447f0a" .
}

sub:provenance {
  <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7> a prov:SoftwareAgent;
    <http://www.w3.org/2000/01/rdf-schema#label> "delphisci claim tester (grok-4.7; cursor/aristotle-claim-tests-7efa)";
    prov:actedOnBehalfOf <https://orcid.org/0009-0007-4948-9192>;
    <https://w3id.org/delphi/ontology/usesModel> <https://w3id.org/delphi/resource/model/grok-4-7> .
  
  <https://w3id.org/delphi/resource/model/grok-4-7> a <https://w3id.org/delphi/ontology/LanguageModel>;
    dc:identifier "grok-4.7" .
  
  sub:assertion prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7>;
    prov:wasDerivedFrom <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-ha01-14/result.json>;
    prov:wasGeneratedBy sub:test .
  
  sub:plan prov:hadPlan <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/README.md> .
  
  sub:test a prov:Activity;
    prov:qualifiedAssociation sub:plan;
    prov:wasAssociatedWith <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7> .
}

sub:pubinfo {
  this: dc:created "2026-11-08T16:24:31.748Z"^^xsd:dateTime;
    dc:creator <https://orcid.org/0009-0007-4948-9192>;
    dc:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:hasNanopubType <https://w3id.org/delphi/ontology/Assessment>;
    npx:introduces <https://w3id.org/delphi/resource/assessment/aristotle-ha01-14--claim-test>;
    <http://www.w3.org/2000/01/rdf-schema#label> "Claim test of aristotle-ha01-14: inconclusive, confidence 0.4";
    <https://w3id.org/delphi/ontology/domain> <https://w3id.org/delphi/resource/domain/aristotle-biology> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAyFHtPB6p0mCjDozxlOY9CmO3nBm7Te3jFbXyLmM+G1tGe47Da0jYIbhkl9Oo1ZjxmCa3LCwlEqK8gj6hEIcL4ahW30JXh9HycfKVk1bugkzMEV15tJdTzAU3sGMFnbNsn43xY2LFLy45tApkRm5byEiM7oRRrooIdwoQKnP4Wzq/bfAoJ9qvW+MGkelyOTd1jbSt+KfmT7xKmDfWzAHddUlWwMX2QJOLxDaffOteTop6ZRgPiNmPJKA/S62Gac9XtSYT3oDkZ6/nr5cxxNLpOyxTf5FPISiCe11xYO/unYjY+mwnOfA8yhJIyx1l0O9I0vpOpn+E5TvyHJV+oSTrvwIDAQAB";
    npx:hasSignature "pG9FuMU7S5zrZBYyFwP7hyGJXIm35WU/c4jj9Y2jjDl1Ip2HnfBp60m3BKpgH5uSvgLAuaQjRWjIBhZTNiPi3Apra+Dhp4uD6VGM3kbbmWsQ/x1RuPG2tLkhHqZBqcldI9epxvyyHoPAIuAqlGdTG+DzB65lgwhEDug/61YtP9aGYXyr3QT05+NrDKeIX6bN4GVJCwxEgznFIKFJoDCK9r6z9IW7EtuNW/59CvK5l298djN3QE6Hy18W34JjOCkyoxnAFasrIPK+0KquKLutZxD6vT/KDLpg3KJ2DsIFjQdfVVT5b5RsmN/M9H1KNQ7S6KhYqsepvb0xIffw8usoAw==";
    npx:hasSignatureTarget this:;
    npx:signedBy <https://orcid.org/0009-0007-4948-9192> .
}