https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/Head
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http://www.nanopub.org/nschema#hasAssertion
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/assertion
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA
http://www.nanopub.org/nschema#hasProvenance
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/provenance
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA
http://www.nanopub.org/nschema#hasPublicationInfo
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/pubinfo
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
http://www.nanopub.org/nschema#Nanopublication
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/assertion
https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
http://www.w3.org/ns/prov#SoftwareAgent
https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium
http://www.w3.org/2000/01/rdf-schema#label
delphisci dataset-resolvability assessor (GPT-5.6 Sol)
https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium
http://www.w3.org/ns/prov#actedOnBehalfOf
https://orcid.org/0009-0007-4948-9192
https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium
https://w3id.org/delphi/ontology/usesModel
https://w3id.org/delphi/resource/model/gpt-5.6-sol-medium
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
http://purl.org/dc/terms/description
The full text gives a detailed enough model description for a computational audit, although exact tabulated parameters and original inputs may still be needed for identity with the reported implementation. Public literature can constrain portions of the force law, but no single open dataset appears to cover the complete parameter bundle. The model can therefore be checked in part, not comprehensively validated as stated.
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
http://purl.org/dc/terms/subject
https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
https://w3id.org/delphi/ontology/LLMClaimAssessment
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
http://www.w3.org/2000/01/rdf-schema#comment
Proposed test with existing data: Implement the stated bead spacing, mass, piecewise force law, bending interaction, mesh, rupture force, and time step, then test numerical stability and compare its force-extension curve with public experimental or atomistic benchmarks. Agreement at the unfolding plateau and rupture regime would support the parameterization; systematic disagreement or timestep-dependent behavior would refute it.
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
http://www.w3.org/2000/01/rdf-schema#label
GPT-5.6 Sol on buehler-2009-helical-networks-10: partially-resolvable, resolvability 0.64
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
http://www.w3.org/ns/prov#wasAttributedTo
https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/ontology/assessmentType
dataset-resolvability/0.2.0
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/ontology/evidenceAgainst
Public single-molecule benchmarks are scattered and may use different proteins and loading rates.
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/ontology/evidenceAgainst
Several quantities are model choices rather than independent empirical predictions.
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/ontology/evidenceAgainst
The original LAMMPS implementation is available only on request.
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/ontology/hasConfidence
0.81
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/ontology/hasEvidence
https://w3id.org/delphi/resource/evidence/buehler-2009-helical-networks-10--gpt--dataset-1
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/ontology/hasScore
0.639
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/ontology/hasVerdict
partially-resolvable
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--analysis-feasibility
http://purl.org/dc/terms/isPartOf
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--analysis-feasibility
http://purl.org/dc/terms/subject
https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-analysis-feasibility
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--analysis-feasibility
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
https://w3id.org/delphi/ontology/LLMClaimAssessment
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--analysis-feasibility
http://www.w3.org/2000/01/rdf-schema#label
Analysis feasibility of buehler-2009-helical-networks-10 by GPT-5.6 Sol: 0.76
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--analysis-feasibility
http://www.w3.org/ns/prov#wasAttributedTo
https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--analysis-feasibility
https://w3id.org/delphi/ontology/assessmentType
dataset-resolvability/0.2.0/analysis-feasibility
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--analysis-feasibility
https://w3id.org/delphi/ontology/hasScore
0.76
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-adequacy
http://purl.org/dc/terms/isPartOf
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-adequacy
http://purl.org/dc/terms/subject
https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-data-adequacy
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-adequacy
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
https://w3id.org/delphi/ontology/LLMClaimAssessment
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-adequacy
http://www.w3.org/2000/01/rdf-schema#label
Data adequacy of buehler-2009-helical-networks-10 by GPT-5.6 Sol: 0.48
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-adequacy
http://www.w3.org/ns/prov#wasAttributedTo
https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-adequacy
https://w3id.org/delphi/ontology/assessmentType
dataset-resolvability/0.2.0/data-adequacy
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-adequacy
https://w3id.org/delphi/ontology/hasScore
0.48
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-existence
http://purl.org/dc/terms/isPartOf
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-existence
http://purl.org/dc/terms/subject
https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-data-existence
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-existence
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
https://w3id.org/delphi/ontology/LLMClaimAssessment
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-existence
http://www.w3.org/2000/01/rdf-schema#label
Data existence of buehler-2009-helical-networks-10 by GPT-5.6 Sol: 0.5
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-existence
http://www.w3.org/ns/prov#wasAttributedTo
https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-existence
https://w3id.org/delphi/ontology/assessmentType
dataset-resolvability/0.2.0/data-existence
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-existence
https://w3id.org/delphi/ontology/hasScore
0.5
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--discriminating-power
http://purl.org/dc/terms/isPartOf
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--discriminating-power
http://purl.org/dc/terms/subject
https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-discriminating-power
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--discriminating-power
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
https://w3id.org/delphi/ontology/LLMClaimAssessment
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--discriminating-power
http://www.w3.org/2000/01/rdf-schema#label
Discriminating power of buehler-2009-helical-networks-10 by GPT-5.6 Sol: 0.62
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--discriminating-power
http://www.w3.org/ns/prov#wasAttributedTo
https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--discriminating-power
https://w3id.org/delphi/ontology/assessmentType
dataset-resolvability/0.2.0/discriminating-power
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--discriminating-power
https://w3id.org/delphi/ontology/hasScore
0.62
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--operationalizability
http://purl.org/dc/terms/isPartOf
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--operationalizability
http://purl.org/dc/terms/subject
https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-operationalizability
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--operationalizability
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
https://w3id.org/delphi/ontology/LLMClaimAssessment
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--operationalizability
http://www.w3.org/2000/01/rdf-schema#label
Operationalizability of buehler-2009-helical-networks-10 by GPT-5.6 Sol: 0.9
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--operationalizability
http://www.w3.org/ns/prov#wasAttributedTo
https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--operationalizability
https://w3id.org/delphi/ontology/assessmentType
dataset-resolvability/0.2.0/operationalizability
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--operationalizability
https://w3id.org/delphi/ontology/hasScore
0.9
https://w3id.org/delphi/resource/claim/buehler-2009-helical-networks-10
https://w3id.org/delphi/ontology/hasAssessment
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/delphi/resource/claim/buehler-2009-helical-networks-10
https://w3id.org/delphi/ontology/hasAssessment
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--analysis-feasibility
https://w3id.org/delphi/resource/claim/buehler-2009-helical-networks-10
https://w3id.org/delphi/ontology/hasAssessment
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-adequacy
https://w3id.org/delphi/resource/claim/buehler-2009-helical-networks-10
https://w3id.org/delphi/ontology/hasAssessment
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--data-existence
https://w3id.org/delphi/resource/claim/buehler-2009-helical-networks-10
https://w3id.org/delphi/ontology/hasAssessment
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--discriminating-power
https://w3id.org/delphi/resource/claim/buehler-2009-helical-networks-10
https://w3id.org/delphi/ontology/hasAssessment
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt--operationalizability
https://w3id.org/delphi/resource/evidence/buehler-2009-helical-networks-10--gpt--dataset-1
http://purl.org/dc/terms/description
open software for reconstructing and checking the coarse-grained model
https://w3id.org/delphi/resource/evidence/buehler-2009-helical-networks-10--gpt--dataset-1
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
https://w3id.org/delphi/ontology/EvidenceItem
https://w3id.org/delphi/resource/evidence/buehler-2009-helical-networks-10--gpt--dataset-1
http://www.w3.org/2000/01/rdf-schema#label
Candidate dataset: LAMMPS
https://w3id.org/delphi/resource/evidence/buehler-2009-helical-networks-10--gpt--dataset-1
http://www.w3.org/ns/prov#wasDerivedFrom
https://www.lammps.org/
https://w3id.org/delphi/resource/model/gpt-5.6-sol-medium
http://purl.org/dc/terms/identifier
gpt-5.6-sol-medium
https://w3id.org/delphi/resource/model/gpt-5.6-sol-medium
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
https://w3id.org/delphi/ontology/LanguageModel
https://w3id.org/delphi/resource/model/gpt-5.6-sol-medium
http://www.w3.org/2000/01/rdf-schema#label
GPT-5.6 Sol
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/provenance
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/assertion
http://www.w3.org/ns/prov#wasAttributedTo
https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/assertion
http://www.w3.org/ns/prov#wasDerivedFrom
https://github.com/fractastical/delphisci/blob/67fe5b156cfeca15a2ded33e0face4177d03101c/claim-sources/buehler-protein-materials/assessment/raw/gpt/batch-3.json
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/assertion
http://www.w3.org/ns/prov#wasDerivedFrom
https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/assertion
http://www.w3.org/ns/prov#wasGeneratedBy
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/assessment
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/assessment
http://www.w3.org/1999/02/22-rdf-syntax-ns#type
http://www.w3.org/ns/prov#Activity
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/assessment
http://www.w3.org/ns/prov#qualifiedAssociation
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/assessmentPlan
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/assessment
http://www.w3.org/ns/prov#wasAssociatedWith
https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gpt-5.6-sol-medium
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/assessmentPlan
http://www.w3.org/ns/prov#hadPlan
https://github.com/fractastical/delphisci/blob/67fe5b156cfeca15a2ded33e0face4177d03101c/claim-sources/buehler-protein-materials/README.md
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/pubinfo
https://w3id.org/delphi/resource/domain/buehler-protein-materials
http://www.w3.org/2000/01/rdf-schema#label
buehler-protein-materials
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA
http://purl.org/dc/terms/created
2026-11-08T04:48:50.317Z
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA
http://purl.org/dc/terms/creator
https://orcid.org/0009-0007-4948-9192
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA
http://purl.org/dc/terms/license
https://creativecommons.org/licenses/by/4.0/
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA
http://purl.org/nanopub/x/hasNanopubType
https://w3id.org/delphi/ontology/LLMClaimAssessment
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA
http://purl.org/nanopub/x/introduces
https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-10--gpt
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA
http://www.w3.org/2000/01/rdf-schema#label
GPT-5.6 Sol on buehler-2009-helical-networks-10: partially-resolvable, resolvability 0.64
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA
https://w3id.org/delphi/ontology/domain
https://w3id.org/delphi/resource/domain/buehler-protein-materials
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/sig
http://purl.org/nanopub/x/hasAlgorithm
RSA
https://w3id.org/np/RATNRFuoDQQYD_xmCZlOvKLEUncd4BPzIp7im8WWx-OCA/sig
http://purl.org/nanopub/x/hasPublicKey
MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAyFHtPB6p0mCjDozxlOY9CmO3nBm7Te3jFbXyLmM+G1tGe47Da0jYIbhkl9Oo1ZjxmCa3LCwlEqK8gj6hEIcL4ahW30JXh9HycfKVk1bugkzMEV15tJdTzAU3sGMFnbNsn43xY2LFLy45tApkRm5byEiM7oRRrooIdwoQKnP4Wzq/bfAoJ9qvW+MGkelyOTd1jbSt+KfmT7xKmDfWzAHddUlWwMX2QJOLxDaffOteTop6ZRgPiNmPJKA/S62Gac9XtSYT3oDkZ6/nr5cxxNLpOyxTf5FPISiCe11xYO/unYjY+mwnOfA8yhJIyx1l0O9I0vpOpn+E5TvyHJV+oSTrvwIDAQAB
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http://purl.org/nanopub/x/hasSignature
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