@prefix this: <https://w3id.org/np/RAOraipKybKuofxTGQpWzWCC8nUYAQ25C0W86x7t3Wdkc> .
@prefix sub: <https://w3id.org/np/RAOraipKybKuofxTGQpWzWCC8nUYAQ25C0W86x7t3Wdkc/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix dc: <http://purl.org/dc/terms/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  <https://w3id.org/delphi/resource/assessment/aristotle-ga01-06--claim-test> a <https://w3id.org/delphi/ontology/Assessment>;
    dc:description "Fetched the pre-registered Animal Diversity Web accounts, cut the Reproduction section, and applied the registered internal, external and near-kidney expressions. The mouse had to code as external or the test was inconclusive. Counts were compared with the registered minima.";
    <http://www.w3.org/2000/01/rdf-schema#comment> "Measured: 0 panel species coded internal (8 birds + 6 oviparous quadrupeds) (n = 11). Interpretation: Aristotle's scope is every bird and every oviparous quadruped (lizards, tortoises and the other scaly reptiles he counted, including crocodiles), and the position is inside the body near the loin by the kidneys, not merely 'no scrotum' with the organ somewhere unstated. The panel is a taxonomic spread, not a random sample of species, so a pass is support across those living groups and not a census of every species. Seasonal change in testis size is not a change of position; the test scores the words the account uses for position.";
    <http://www.w3.org/2000/01/rdf-schema#label> "Claim test of aristotle-ga01-06: inconclusive, confidence 0.3";
    <http://www.w3.org/2000/01/rdf-schema#seeAlso> <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-ga01-06/result.json>;
    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7>;
    <https://w3id.org/delphi/ontology/admissibleDatasets> "A public species account that has a Reproduction section, for a panel fixed before the pages are read: eight birds spread across palaeognaths, galloanserans, a columbid, a strigiform, a swift, a penguin and a passerine, and six oviparous quadrupeds covering a crocodile, two turtles, two lizards and the tuatara. Snakes are omitted because the claim names quadrupeds. The mouse is a method check, not a member of the claim's scope.";
    <https://w3id.org/delphi/ontology/assessmentType> "claim-test/0.1.0";
    <https://w3id.org/delphi/ontology/dataKind> "biological";
    <https://w3id.org/delphi/ontology/disconfirmingObservation> "Any listed bird or oviparous quadruped whose Reproduction section describes external, scrotal or descended testes, on a coder that also flags the mouse as external.";
    <https://w3id.org/delphi/ontology/evidenceAgainst> "Accounts are compiled prose. A pass is a count of how those accounts describe position. Confidence on a pass is capped at 0.6.",
      "Before registration, the Gallus gallus account URL returned HTTP 200 on HEAD. No Reproduction section had been read.",
      "The panel was chosen for taxonomic coverage. It was not chosen by opening the accounts.";
    <https://w3id.org/delphi/ontology/expectedObservation> "The Reproduction section of the pre-listed birds and oviparous quadrupeds describes internal testes near the kidneys, while the mouse account describes external testes.";
    <https://w3id.org/delphi/ontology/failCriterion> "Pre-registered. The claim is refuted if the mouse codes external and at least one bird or oviparous quadruped codes external. If the mouse is external, no bird or quadruped codes external, and the pass counts are not met, the verdict is mixed. If the mouse is not external, or fewer than 6 bird pages and 4 quadruped pages return a Reproduction section, the verdict is inconclusive with reason other when the method check fails and data-unavailable when the pages do not return. Unknown is not external and does not count toward the internal minimum.";
    <https://w3id.org/delphi/ontology/hasConfidence> "0.3"^^xsd:double;
    <https://w3id.org/delphi/ontology/hasEvidence> <https://w3id.org/delphi/resource/evidence/aristotle-ga01-06--claim-test--dataset-1>;
    <https://w3id.org/delphi/ontology/hasVerdict> "inconclusive";
    <https://w3id.org/delphi/ontology/hypothesis> "If the claim holds, public species accounts place the testes inside the body, near the kidneys, for birds and for oviparous quadrupeds, and the same coding detects the external testes of a mouse.";
    <https://w3id.org/delphi/ontology/inferenceMethod> "Fixed regular expressions on the Reproduction section only. The mouse must code external or the test stops as inconclusive. Pass and fail are counts against the panel, not a sample proportion with a confidence interval.";
    <https://w3id.org/delphi/ontology/passCriterion> "Pre-registered. Fetch the Animal Diversity Web account for each binomial below and score only the Reproduction section. Internal matches 'testes' within 40 characters of internal, abdominal, intra-abdominal, 'within the body' or 'body cavity', in either order, or testes within 30 characters of kidney, loin or lumbar. External matches scrotum, or testes within 40 characters of external, scrotal or descended. Near-kidney matches kidney, loin, lumbar, 'dorsal body wall' or retroperitoneal in that section. A species is internal only if an internal pattern matches and an external pattern does not; external only if the reverse; conflict if both; unknown if neither. The method check is Mus musculus, which must code external. Birds: Struthio camelus, Gallus gallus, Anas platyrhynchos, Columba livia, Bubo bubo, Apus apus, Spheniscus demersus, Passer domesticus. Oviparous quadrupeds: Crocodylus niloticus, Testudo graeca, Podarcis muralis, Varanus niloticus, Sphenodon punctatus, Chelydra serpentina. The claim passes if the mouse is external, at least 7 of 8 birds are internal, at least 5 of 6 quadrupeds are internal, at least 5 of 6 quadrupeds match near-kidney, and no bird or quadruped is external.";
    <https://w3id.org/delphi/ontology/preregistered> "false"^^xsd:boolean .
  
  <https://w3id.org/delphi/resource/claim/aristotle-ga01-06> <https://w3id.org/delphi/ontology/hasAssessment>
      <https://w3id.org/delphi/resource/assessment/aristotle-ga01-06--claim-test> .
  
  <https://w3id.org/delphi/resource/evidence/aristotle-ga01-06--claim-test--dataset-1>
    a <https://w3id.org/delphi/ontology/EvidenceItem>;
    dc:description "reproduction-section statements of testis position";
    dc:license "accounts are published by the University of Michigan Museum of Zoology; see each page";
    <http://www.w3.org/2000/01/rdf-schema#label> "Dataset: Animal Diversity Web species accounts for the pre-registered panel";
    prov:atLocation <https://animaldiversity.org/accounts/Anas_platyrhynchos/>, <https://animaldiversity.org/accounts/Apus_apus/>,
      <https://animaldiversity.org/accounts/Bubo_bubo/>, <https://animaldiversity.org/accounts/Chelydra_serpentina/>,
      <https://animaldiversity.org/accounts/Columba_livia/>, <https://animaldiversity.org/accounts/Crocodylus_niloticus/>,
      <https://animaldiversity.org/accounts/Gallus_gallus/>, <https://animaldiversity.org/accounts/Mus_musculus/>,
      <https://animaldiversity.org/accounts/Passer_domesticus/>, <https://animaldiversity.org/accounts/Podarcis_muralis/>,
      <https://animaldiversity.org/accounts/Spheniscus_demersus/>, <https://animaldiversity.org/accounts/Sphenodon_punctatus/>,
      <https://animaldiversity.org/accounts/Struthio_camelus/>, <https://animaldiversity.org/accounts/Testudo_graeca/>,
      <https://animaldiversity.org/accounts/Varanus_niloticus/>;
    prov:wasDerivedFrom <https://animaldiversity.org/>;
    <https://w3id.org/delphi/ontology/hasChecksum> "sha256:0f1efabf0a6b590877860df64f2e3db5fcd2cde0ca29372ff4fe62c2a9c6d8d1",
      "sha256:1fed845608f6689230aed71ae8554e8e562886543ed516feeff04fed14ffbdc8", "sha256:22ef79f5d647e1ef2ff911ebcacad932a3a8521bc7162487b90adbf55c4e722c",
      "sha256:2636a1d60a53ab84e5af9cc829d92fd88f60f5be864b70666d0aa3bb1617bb70", "sha256:2979aa5b6ef9c02e71e41584c074bbd9fe2ee154d6af68d3d0181772118afbdb",
      "sha256:4cdbef5d6305546500697e1d88b58216b3c053ab8acd4cdf3b725756490b6239", "sha256:5f3da805c66ba23ca77b70a45c56bb47b7839cd479ee9eb8b0d4633006f6fd3d",
      "sha256:65c5547793e554a8e983bd1277346f9d7be477034e59b97e09700fab49715247", "sha256:681efc6a4364454415a8590c069a62480d50ba2f10d1aeb9fef55249bb46f452",
      "sha256:b34ca3b0a34c0f4691d2c791ad98281f1b3a5f5ad98a2d1d86e1cca08e083ff4", "sha256:bde4ca661c73ce36a756bb5e6eee49fb99ecb6aa94c3cd96b2ea2faf819be601",
      "sha256:c5b53d4a08c57e0cc85e823444e08959c92785e52a53a31290391107fb024547", "sha256:c8ef612c055ca6f2b7bc06636aedbeeda5a7fd403f7a187920665cfa627b64f0",
      "sha256:da0c231582843e94ca469465fee4a75680a6df9ca45477314a0ad372220a8511", "sha256:f56d287d3344390a7e957e20cd7d684470ecdcbe31b2799b86a528ff0d26450f" .
}

sub:provenance {
  <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7> a prov:SoftwareAgent;
    <http://www.w3.org/2000/01/rdf-schema#label> "delphisci claim tester (Grok 4.7; cursor/aristotle-biology-claim-tests-cf1c)";
    prov:actedOnBehalfOf <https://orcid.org/0009-0007-4948-9192>;
    <https://w3id.org/delphi/ontology/usesModel> <https://w3id.org/delphi/resource/model/grok-4-7> .
  
  <https://w3id.org/delphi/resource/model/grok-4-7> a <https://w3id.org/delphi/ontology/LanguageModel>;
    dc:identifier "Grok 4.7" .
  
  sub:assertion prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7>;
    prov:wasDerivedFrom <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-ga01-06/result.json>;
    prov:wasGeneratedBy sub:test .
  
  sub:plan prov:hadPlan <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/README.md> .
  
  sub:test a prov:Activity;
    prov:qualifiedAssociation sub:plan;
    prov:wasAssociatedWith <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7> .
}

sub:pubinfo {
  this: dc:created "2026-11-08T16:24:31.724Z"^^xsd:dateTime;
    dc:creator <https://orcid.org/0009-0007-4948-9192>;
    dc:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:hasNanopubType <https://w3id.org/delphi/ontology/Assessment>;
    npx:introduces <https://w3id.org/delphi/resource/assessment/aristotle-ga01-06--claim-test>;
    <http://www.w3.org/2000/01/rdf-schema#label> "Claim test of aristotle-ga01-06: inconclusive, confidence 0.3";
    <https://w3id.org/delphi/ontology/domain> <https://w3id.org/delphi/resource/domain/aristotle-biology> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAyFHtPB6p0mCjDozxlOY9CmO3nBm7Te3jFbXyLmM+G1tGe47Da0jYIbhkl9Oo1ZjxmCa3LCwlEqK8gj6hEIcL4ahW30JXh9HycfKVk1bugkzMEV15tJdTzAU3sGMFnbNsn43xY2LFLy45tApkRm5byEiM7oRRrooIdwoQKnP4Wzq/bfAoJ9qvW+MGkelyOTd1jbSt+KfmT7xKmDfWzAHddUlWwMX2QJOLxDaffOteTop6ZRgPiNmPJKA/S62Gac9XtSYT3oDkZ6/nr5cxxNLpOyxTf5FPISiCe11xYO/unYjY+mwnOfA8yhJIyx1l0O9I0vpOpn+E5TvyHJV+oSTrvwIDAQAB";
    npx:hasSignature "kiPQd2LXaCvqJ5Um9bAekuHnhzg7vI9z5SPCwE+GQQDO26VjAl0Wo2NHsDDWppss1d4jknzv+aovudbTKfN3Sal8DR+oGZuYNoBV9NTOAkQUmgZZkqTOkn+vNEZIJihkF/QlH6ly54blw5PaKorH5PJpBiMemf1J3/kQEiy1eBahRUQROldiiYE5O5kDeaWXGp36q0vQosH0bOpBxVw3BsedG6vjp89p/0BMEhgLvZqmVguPKyXRYoiCXGQrfhlobmP8gSazgbp5Lb505kJxB16//FDPyK8j3T0iPHE0nvVRb3rv7vCPDApjVqj/wJc679H/KKsK7+KLA7plbBPxXQ==";
    npx:hasSignatureTarget this:;
    npx:signedBy <https://orcid.org/0009-0007-4948-9192> .
}