https://w3id.org/np/RAONAV9Koku4oQiJTJcVbeUfdKCOef_1Aqa2Zc44OggnY
.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt
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sub:Head {
this: a np:Nanopublication;
np:hasAssertion sub:assertion;
np:hasProvenance sub:provenance;
np:hasPublicationInfo sub:pubinfo .
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sub:assertion {
<https://w3id.org/delphi/resource/assessment/aristotle-ha09-13--claim-test> a <https://w3id.org/delphi/ontology/Assessment>;
dc:description "Fetched the Honza et al. 2019 figshare workbook and checked its byte size, MD5 and SHA-256. Dropped rows with no egg number, grouped the remaining rows by study year and nest number, and counted rows as cuckoo eggs. A nest was inconsistent when that count differed from the maximum egg-number value. Applied the pre-registered thresholds to the consistent nests. No column recorded the nest builder or host hatching and rearing, so those clauses stayed untested. The acceptance field was tallied and was not an input to the verdict.";
<http://www.w3.org/2000/01/rdf-schema#comment> "Measured: 0.6617 share of consistent host nests with exactly one cuckoo egg (n = 266). Interpretation: The quote says the cuckoo lays only one egg and does not hatch it, and that the bird in whose nest the egg was placed hatches and rears it. The claim sentence adds that the cuckoo builds no nest. 'Only one egg' is read as one cuckoo egg in a given host nest, which is what 'in the nest of another bird' and the singular foster mother refer to, not as one egg in a lifetime. Two eggs in one nest fail that reading whether they were laid by one female or by two. The scope names the common cuckoo and four foster kinds: ring-dove, lark, hypolais and green linnet, mapped here to Columba palumbus, Alaudidae, Hippolais or Iduna, and Chloris chloris. A table from another host still measures the cuckoo's laying, and the confidence cap records that it is not those four kinds. This does not test why the cuckoo parasitizes nests.";
<http://www.w3.org/2000/01/rdf-schema#label> "Claim test of aristotle-ha09-13: mixed, confidence 0.7";
<http://www.w3.org/2000/01/rdf-schema#seeAlso> <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-ha09-13/result.json>;
prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7>;
<https://w3id.org/delphi/ontology/admissibleDatasets> "A public table of individual common-cuckoo eggs or parasitized nests, with a nest identifier and a count or sequence number of cuckoo eggs in that nest, compiled independently of Aristotle. Login-walled nest schemes are not admissible. A host other than the four Aristotle names is admissible for the cuckoo's laying, with the confidence cap stated in the criteria.";
<https://w3id.org/delphi/ontology/assessmentType> "claim-test/0.1.0";
<https://w3id.org/delphi/ontology/dataKind> "biological";
<https://w3id.org/delphi/ontology/disconfirmingObservation> "The typical scored nest contains two or more cuckoo eggs, or a row records a nest the cuckoo built, or the host hatches or rears the young in fewer than half of the single-egg nests.";
<https://w3id.org/delphi/ontology/evidenceAgainst> "Egg acceptance is not hatching or rearing. A high acceptance rate will not be treated as the foster mother rearing the young.",
"The dataset title says the eggs were in nests of the cuckoo's common host but does not name that host. The host, if stated inside the sheet, is recorded at analysis time and only then compared with the four named kinds.",
"The figshare description lists the columns, including 'no. of the Cuckoo egg laid within the host nest (egg no.)', and the file's size and md5 were read from the figshare API. The spreadsheet itself was not downloaded before this registration.";
<https://w3id.org/delphi/ontology/expectedObservation> "In a table of common-cuckoo eggs laid in other birds' nests, each scored nest contains one cuckoo egg, the cuckoo is not the nest builder, and the host hatches or rears the young.";
<https://w3id.org/delphi/ontology/failCriterion> "Pre-registered. The claim is refuted if any one tested clause fails and at least 30 consistent nests were scored. The egg clause fails if the median number of cuckoo eggs per nest is 2 or more, or if fewer than 50 percent of consistent nests have exactly one cuckoo egg. The nest-building clause fails if any row records that the cuckoo built the nest. The rearing clause fails if a hatching or rearing column shows the host hatched or reared the young in fewer than 50 percent of single-egg nests. Confidence 0.85 if the nest count is at least 50, otherwise 0.7; if the host is not one of the four kinds named in the scope, confidence is capped at 0.7. If the egg clause neither passes nor fails (at least 30 nests, median 1, and the share with exactly one egg is at least 50 percent but below 95 percent), or a tested rearing column falls between 50 and 90 percent, and no clause fails, the verdict is mixed, with confidence 0.75 if the nest count is at least 50 and 0.6 otherwise, again capped at 0.7 when the host is not one of the four named kinds. If fewer than 30 consistent nests can be scored, the verdict is inconclusive with reason underpowered (confidence 0.5). If the year, nest or egg-number columns cannot be found, or the file cannot be retrieved, the verdict is inconclusive with reason data-unavailable (confidence 0.8). If the egg clause passes but nest-building or rearing is absent from the table, the verdict is inconclusive with reason other (confidence 0.6): the full sentence was not measured. The acceptance column, if present, is summarized and is not a verdict input.";
<https://w3id.org/delphi/ontology/hasConfidence> "0.7"^^xsd:double;
<https://w3id.org/delphi/ontology/hasEvidence> <https://w3id.org/delphi/resource/evidence/aristotle-ha09-13--claim-test--dataset-1>;
<https://w3id.org/delphi/ontology/hasVerdict> "mixed";
<https://w3id.org/delphi/ontology/hypothesis> "If the claim holds, the common cuckoo does not build a nest, places a single egg in another bird's nest, and leaves that bird to hatch and rear it.";
<https://w3id.org/delphi/ontology/inferenceMethod> "Count rows per year-and-nest, cross-check against the maximum egg-number field, and compare the share of exactly-one-egg nests and the median with the thresholds in pass_criterion and fail_criterion. Nest builder and host hatching or rearing are scored only from columns whose headers say so. Egg acceptance is reported and ignored for the verdict. No assessor score is used.";
<https://w3id.org/delphi/ontology/passCriterion> "Pre-registered (claim supported). Using Honza, Požgayová, Procházka and Koleček's figshare table (doi 10.6084/m9.figshare.10259885.v1), group rows by study year and nest number. Each row is one cuckoo egg. For each nest, the egg count is the number of rows. A nest is inconsistent if that row count differs from the maximum of the 'egg no.' field, and the test stops as inconclusive with reason other if more than 10 percent of nests are inconsistent. The egg clause passes if at least 30 consistent nests remain, the median egg count is 1, and at least 95 percent of those nests have exactly one cuckoo egg. The nest-building clause passes only if a column states who built the nest and no row records a cuckoo-built nest. The rearing clause passes only if a column records hatching or rearing by the host, distinct from egg acceptance, and at least 90 percent of single-egg nests in that column were hatched or reared by the host. The claim is supported only if all three clauses pass. Confidence 0.7 if the host species is a ring-dove (Columba palumbus), a lark (Alaudidae), a hypolais (Hippolais or Iduna) or a greenfinch (Chloris chloris), and 0.55 otherwise.";
<https://w3id.org/delphi/ontology/preregistered> "false"^^xsd:boolean .
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<https://w3id.org/delphi/resource/assessment/aristotle-ha09-13--claim-test> .
<https://w3id.org/delphi/resource/evidence/aristotle-ha09-13--claim-test--dataset-1>
a <https://w3id.org/delphi/ontology/EvidenceItem>;
dc:description "one row per common-cuckoo egg in a host nest, with year, nest number and the egg's sequence number in that nest";
dc:license "CC BY 4.0";
<http://www.w3.org/2000/01/rdf-schema#label> "Dataset: Data from: Errors in egg laying by female Common Cuckoo Cuculus canorus in nests of its common host";
prov:atLocation <https://ndownloader.figshare.com/files/18528095>;
prov:wasDerivedFrom <https://figshare.com/articles/dataset/Data_from_Errors_in_egg_laying_by_female_Common_Cuckoo_Cuculus_canorus_in_nests_of_its_common_host/10259885>;
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sub:provenance {
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<http://www.w3.org/2000/01/rdf-schema#label> "delphisci claim tester (grok-4.7; cursor/aristotle-biology-claim-tests-a564)";
prov:actedOnBehalfOf <https://orcid.org/0009-0007-4948-9192>;
<https://w3id.org/delphi/ontology/usesModel> <https://w3id.org/delphi/resource/model/grok-4-7> .
<https://w3id.org/delphi/resource/model/grok-4-7> a <https://w3id.org/delphi/ontology/LanguageModel>;
dc:identifier "grok-4.7" .
sub:assertion prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7>;
prov:wasDerivedFrom <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-ha09-13/result.json>;
prov:wasGeneratedBy sub:test .
sub:plan prov:hadPlan <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/README.md> .
sub:test a prov:Activity;
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prov:wasAssociatedWith <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7> .
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sub:pubinfo {
this: dc:created "2026-11-08T16:24:31.784Z"^^xsd:dateTime;
dc:creator <https://orcid.org/0009-0007-4948-9192>;
dc:license <https://creativecommons.org/licenses/by/4.0/>;
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npx:introduces <https://w3id.org/delphi/resource/assessment/aristotle-ha09-13--claim-test>;
<http://www.w3.org/2000/01/rdf-schema#label> "Claim test of aristotle-ha09-13: mixed, confidence 0.7";
<https://w3id.org/delphi/ontology/domain> <https://w3id.org/delphi/resource/domain/aristotle-biology> .
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