@prefix this: <https://w3id.org/np/RALmo_azFhiO0Nk3fo3Zl3Lqpph-ODLijOUq805f59ZBA> .
@prefix sub: <https://w3id.org/np/RALmo_azFhiO0Nk3fo3Zl3Lqpph-ODLijOUq805f59ZBA/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix dc: <http://purl.org/dc/terms/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

sub:Head {
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    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
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    a prov:SoftwareAgent;
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  <https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-05--gemini>
    a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
    dc:description "This claim combines an explicit arithmetic calculation from the model's stated work-to-fracture and mesh area with a comparison to standard crystalline silicon mechanical properties. Both the integral under the single-filament force-displacement curve and the division by mesh area can be verified analytically in minutes from the published open-access text. Reference values for silicon's (111) fracture surface energy (~1.1–1.24 J/m²) and elastic modulus are universally available in public materials databases.";
    dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0>;
    <http://www.w3.org/2000/01/rdf-schema#comment> "Proposed test with existing data: Integrate the piecewise-linear force-extension curve of a single 12 nm alpha-helical element up to covalent bond rupture to verify W = 1.63 × 10⁻¹⁷ J, divide by the mesh cross-sectional area A = 1.2 × 10⁻¹⁷ m² (or 2A for two fracture surfaces), and compare the resulting fracture surface energy (~0.68–1.36 J/m²) and small-strain alpha-helix modulus (~3 GPa) against reference values for silicon <111> cleavage energy and Young's modulus.";
    <http://www.w3.org/2000/01/rdf-schema#label> "Gemini 4 Argon on buehler-2009-helical-networks-05: resolvable-now, resolvability 0.90";
    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gemini-4-argon-medium>;
    <https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0";
    <https://w3id.org/delphi/ontology/evidenceAgainst> "Text equations have a minor factor-of-two convention ambiguity between W/A (1.36 J/m²) and W/(2A) (0.68 J/m²), though both are of order 1 J/m² like silicon <111>.";
    <https://w3id.org/delphi/ontology/hasConfidence> "0.9"^^xsd:double;
    <https://w3id.org/delphi/ontology/hasEvidence> <https://w3id.org/delphi/resource/evidence/buehler-2009-helical-networks-05--gemini--dataset-1>,
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    <https://w3id.org/delphi/ontology/hasScore> "0.898"^^xsd:double;
    <https://w3id.org/delphi/ontology/hasVerdict> "resolvable-now" .
  
  <https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-05--gemini--analysis-feasibility>
    a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
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    <http://www.w3.org/2000/01/rdf-schema#label> "Analysis feasibility of buehler-2009-helical-networks-05 by Gemini 4 Argon: 0.95";
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    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gemini-4-argon-medium>;
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  <https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-05--gemini--data-existence>
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    dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-data-existence>;
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    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gemini-4-argon-medium>;
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  <https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-05--gemini--discriminating-power>
    a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
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    dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-discriminating-power>;
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    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gemini-4-argon-medium>;
    <https://w3id.org/delphi/ontology/assessmentType> "dataset-resolvability/0.2.0/discriminating-power";
    <https://w3id.org/delphi/ontology/hasScore> "0.85"^^xsd:double .
  
  <https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-05--gemini--operationalizability>
    a <https://w3id.org/delphi/ontology/LLMClaimAssessment>;
    dc:isPartOf <https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-05--gemini>;
    dc:subject <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0-operationalizability>;
    <http://www.w3.org/2000/01/rdf-schema#label> "Operationalizability of buehler-2009-helical-networks-05 by Gemini 4 Argon: 0.95";
    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gemini-4-argon-medium>;
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  <https://w3id.org/delphi/resource/claim/buehler-2009-helical-networks-05> <https://w3id.org/delphi/ontology/hasAssessment>
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      <https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-05--gemini--discriminating-power>,
      <https://w3id.org/delphi/resource/assessment/buehler-2009-helical-networks-05--gemini--operationalizability> .
  
  <https://w3id.org/delphi/resource/evidence/buehler-2009-helical-networks-05--gemini--dataset-1>
    a <https://w3id.org/delphi/ontology/EvidenceItem>;
    dc:description "open-access source of the piecewise force-extension parameters, element dimensions, and fracture energy formula";
    <http://www.w3.org/2000/01/rdf-schema#label> "Candidate dataset: Ackbarow et al. 2009 PLoS ONE Full Text and Parameter Table";
    prov:wasDerivedFrom <https://doi.org/10.1371/journal.pone.0006015> .
  
  <https://w3id.org/delphi/resource/evidence/buehler-2009-helical-networks-05--gemini--dataset-2>
    a <https://w3id.org/delphi/ontology/EvidenceItem>;
    dc:description "public materials database providing reference elastic tensor and cleavage/surface energy benchmarks for crystalline silicon";
    <http://www.w3.org/2000/01/rdf-schema#label> "Candidate dataset: Materials Project";
    prov:wasDerivedFrom <https://materialsproject.org/> .
  
  <https://w3id.org/delphi/resource/model/gemini-4-argon-medium> a <https://w3id.org/delphi/ontology/LanguageModel>;
    dc:identifier "gemini-4-argon-medium";
    <http://www.w3.org/2000/01/rdf-schema#label> "Gemini 4 Argon" .
}

sub:provenance {
  sub:assertion prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gemini-4-argon-medium>;
    prov:wasDerivedFrom <https://github.com/fractastical/delphisci/blob/67fe5b156cfeca15a2ded33e0face4177d03101c/claim-sources/buehler-protein-materials/assessment/raw/gemini/batch-2.json>,
      <https://w3id.org/delphi/resource/concept/dataset-resolvability-0.2.0>;
    prov:wasGeneratedBy sub:assessment .
  
  sub:assessment a prov:Activity;
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    prov:wasAssociatedWith <https://w3id.org/delphi/resource/agent/delphisci-resolvability-assessor-gemini-4-argon-medium> .
  
  sub:assessmentPlan prov:hadPlan <https://github.com/fractastical/delphisci/blob/67fe5b156cfeca15a2ded33e0face4177d03101c/claim-sources/buehler-protein-materials/README.md> .
}

sub:pubinfo {
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      "buehler-protein-materials" .
  
  this: dc:created "2026-11-08T04:48:50.317Z"^^xsd:dateTime;
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    dc:license <https://creativecommons.org/licenses/by/4.0/>;
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    <https://w3id.org/delphi/ontology/domain> <https://w3id.org/delphi/resource/domain/buehler-protein-materials> .
  
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