https://w3id.org/np/RAEG40AAZHMnCr8yTecW7xHu5dpsX1LDozXSQ_4QamLRY/Head https://w3id.org/np/RAEG40AAZHMnCr8yTecW7xHu5dpsX1LDozXSQ_4QamLRY http://www.nanopub.org/nschema#hasAssertion https://w3id.org/np/RAEG40AAZHMnCr8yTecW7xHu5dpsX1LDozXSQ_4QamLRY/assertion https://w3id.org/np/RAEG40AAZHMnCr8yTecW7xHu5dpsX1LDozXSQ_4QamLRY http://www.nanopub.org/nschema#hasProvenance https://w3id.org/np/RAEG40AAZHMnCr8yTecW7xHu5dpsX1LDozXSQ_4QamLRY/provenance https://w3id.org/np/RAEG40AAZHMnCr8yTecW7xHu5dpsX1LDozXSQ_4QamLRY http://www.nanopub.org/nschema#hasPublicationInfo https://w3id.org/np/RAEG40AAZHMnCr8yTecW7xHu5dpsX1LDozXSQ_4QamLRY/pubinfo https://w3id.org/np/RAEG40AAZHMnCr8yTecW7xHu5dpsX1LDozXSQ_4QamLRY http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.nanopub.org/nschema#Nanopublication https://w3id.org/np/RAEG40AAZHMnCr8yTecW7xHu5dpsX1LDozXSQ_4QamLRY/assertion https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test http://purl.org/dc/terms/description MorphoSource media and physical objects were searched with q=kidney and search_field=all_fields. Each hit's title, part, and description were required to contain 'kidney'. The binomial was placed with the GBIF species match, treating GBIF's class Testudines as the tortoise clade. Clade media totals were read from per_page=1 taxonomy facets so a zero kidney count could be compared with an archive that does hold those animals. No absence field was present. Shape words were scored only on bird kidney records. https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/delphi/ontology/Assessment https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test http://www.w3.org/2000/01/rdf-schema#comment Measured: 1 species with a kidney-tagged media record (n = 1). Interpretation: Feathers map to Aves. Scales map to Actinopterygii, the bony fishes Aristotle called scaly, and scaly plates map to Squamata and Crocodylia. Sea and land tortoises map to Testudines, the stated exception. A kidney is a MorphoSource physical-object or media record whose own title, element, or description contains 'kidney', not a match that appears only in a cited paper title. Flattened kidney-like bodies are those bird records whose text says flat, flattened, or lobed. One species is not a test of 'all'. https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test http://www.w3.org/2000/01/rdf-schema#label Claim test of aristotle-pa03-23: inconclusive, confidence 0.76 https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test http://www.w3.org/2000/01/rdf-schema#seeAlso https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-pa03-23/result.json https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test http://www.w3.org/ns/prov#wasAttributedTo https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7 https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/admissibleDatasets MorphoSource specimen or media metadata that carries a taxon and a title, element, or description. A skeletal archive that never mentions kidneys cannot be read as evidence that kidneys are absent. Wikipedia and single-species anecdotes are not admissible. https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/assessmentType claim-test/0.1.0 https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/dataKind biological https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/disconfirmingObservation Kidney-tagged species at or above the pre-registered floor in Aves (5), Squamata (3), Crocodylia (3), or Actinopterygii (5). https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/evidenceAgainst The archive is not empty. Media totals are 8,553 Aves, 10,498 Squamata, 1,252 Crocodylia, 9,194 Actinopterygii, and 5,220 Testudines. Those are media records, not species scored for kidneys. A zero kidney count in a skeletal archive is not evidence that kidneys are lacking. https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/evidenceAgainst The media license field is empty. GBIF currently returns Testudines as the class rather than the order; the script maps either rank. https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/evidenceAgainst The only kidney-tagged record is media 000435760, part kidneys, for Gopherus polyphemus, a tortoise (GBIF class Testudines, family Testudinidae). One tortoise is below the pre-registered floors (5 bird species, 3 squamate, 3 crocodilian, or 5 ray-finned fish species) and there is no field that codes the kidney as absent, so the absence clause is not supported and not refuted. https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/evidenceAgainst The shape clause is untested: no bird kidney record exists on which to read flat, flattened, or lobed. https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/expectedObservation No kidney-tagged species outside Testudines in Aves, Squamata, Crocodylia, and Actinopterygii, with an explicit absence code on at least 20 species per clade, plus at least one bird record described as flat, flattened, or lobed. https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/failCriterion The absence clause refutes if kidney-tagged specimen metadata identifies the organ in at least 5 Aves species, or at least 3 Squamata species, or at least 3 Crocodylia species, or at least 5 Actinopterygii species. Those floors are the denominator: a smaller positive count is inconclusive (underpowered), and the species are named. The shape clause is untested when those words are missing; missing words do not refute it. Overall verdict is refutes only when the absence clause refutes and the shape clause supports. If absence refutes and shape is untested, the verdict is mixed and the clauses are named. If the API returns no taxonomy, or neither clause meets its floor and there is no explicit absence code, the verdict is inconclusive with reason data-unavailable or underpowered. https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/hasConfidence 0.76 https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/hasEvidence https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/hasEvidence https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-2 https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/hasVerdict inconclusive https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/hypothesis If the claim holds, animals with feathers, scales, or scaly plates have no kidney records except tortoises, and some birds are recorded as having flattened kidney-like bodies. https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/inferenceMethod Count distinct binomials whose own metadata contains 'kidney', by clade. Apply the floors in the pass and fail criteria. Do not treat a zero search hit as absence. Score the shape clause only from the words flat, flattened, or lobed on bird kidney records. https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/passCriterion The absence clause supports only if MorphoSource metadata explicitly codes the kidney as absent for at least 20 species in each of Aves, Squamata, Crocodylia, and Actinopterygii, and codes it present for at least one tortoise species (Testudines). A search that merely returns no kidney-tagged specimens does not support absence, because the archive is mostly skeletons. The shape clause supports if at least one bird species with a kidney-tagged record has the words flat, flattened, or lobed in the specimen title or description. Overall supports only if both clauses support. https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/ontology/preregistered false https://w3id.org/delphi/resource/claim/aristotle-pa03-23 https://w3id.org/delphi/ontology/hasAssessment https://w3id.org/delphi/resource/assessment/aristotle-pa03-23--claim-test https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 http://purl.org/dc/terms/description kidney-tagged specimen metadata and archive coverage by clade https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 http://purl.org/dc/terms/license unresolved. The one media record has an empty license field, and this run did not retrieve a separate rights statement. https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/delphi/ontology/EvidenceItem https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 http://www.w3.org/2000/01/rdf-schema#label Dataset: MorphoSource media and physical-object search for kidney https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 http://www.w3.org/ns/prov#atLocation https://www.morphosource.org/api/media?f.taxonomy_gbif=Actinopterygii&per_page=1&page=1 https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 http://www.w3.org/ns/prov#atLocation https://www.morphosource.org/api/media?f.taxonomy_gbif=Aves&per_page=1&page=1 https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 http://www.w3.org/ns/prov#atLocation https://www.morphosource.org/api/media?f.taxonomy_gbif=Crocodylia&per_page=1&page=1 https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 http://www.w3.org/ns/prov#atLocation https://www.morphosource.org/api/media?f.taxonomy_gbif=Squamata&per_page=1&page=1 https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 http://www.w3.org/ns/prov#atLocation https://www.morphosource.org/api/media?f.taxonomy_gbif=Testudines&per_page=1&page=1 https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 http://www.w3.org/ns/prov#atLocation https://www.morphosource.org/api/media?q=kidney&search_field=all_fields&per_page=50&page=1 https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 http://www.w3.org/ns/prov#atLocation https://www.morphosource.org/api/physical-objects?q=kidney&search_field=all_fields&per_page=50&page=1 https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 http://www.w3.org/ns/prov#wasDerivedFrom https://www.morphosource.org/ https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 https://w3id.org/delphi/ontology/hasChecksum sha256:19114852437145bdc82a99cbf88a6675a4665760ba10954a622af33ae0cd2597 https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 https://w3id.org/delphi/ontology/hasChecksum sha256:2b24c0be7d6aa8f0653f3f8130bf17f7fcc8d210b7b02e0b0cf45308a3793eca https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 https://w3id.org/delphi/ontology/hasChecksum sha256:79faaa3d7c5894b2aa2595e71b73d8ed5b7e53bf102084325248fc89baf6aa10 https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 https://w3id.org/delphi/ontology/hasChecksum sha256:8e912539147e566ac867bebbabb303f0d17c24f9ed8e17559a3a669261b631f0 https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 https://w3id.org/delphi/ontology/hasChecksum sha256:a80171ea4b7787fd472ddc2f8cbb731123707c936afac9c05c743d61ae33e69f https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 https://w3id.org/delphi/ontology/hasChecksum sha256:c46a36bebc1a17d9a6af62dc2ceb1dd434c76d28a71ebb03a103b4ad7789d23a https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-1 https://w3id.org/delphi/ontology/hasChecksum sha256:d150fb97738eb89e876e99e720bc4a4b876c88a2994aa4b1812844e21a101969 https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-2 http://purl.org/dc/terms/description place Gopherus polyphemus in Testudines https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-2 http://purl.org/dc/terms/license unresolved. The match response contains no license field. https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-2 http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/delphi/ontology/EvidenceItem https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-2 http://www.w3.org/2000/01/rdf-schema#label Dataset: GBIF species match for names returned by the kidney search https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-2 http://www.w3.org/ns/prov#atLocation https://api.gbif.org/v1/species/match?name=Gopherus+polyphemus https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-2 http://www.w3.org/ns/prov#wasDerivedFrom https://www.gbif.org/ https://w3id.org/delphi/resource/evidence/aristotle-pa03-23--claim-test--dataset-2 https://w3id.org/delphi/ontology/hasChecksum sha256:6743059439508949fee8a23792a51f503de7b0db18a719e1956481f4a8a0af38 https://w3id.org/np/RAEG40AAZHMnCr8yTecW7xHu5dpsX1LDozXSQ_4QamLRY/provenance https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#SoftwareAgent https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7 http://www.w3.org/2000/01/rdf-schema#label delphisci claim tester (grok-4.7; 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