[ { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/pubinfo", "@graph": [ { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw", "http://purl.org/dc/terms/created": [ { "@value": "2026-11-08T16:24:31.758Z", "@type": "http://www.w3.org/2001/XMLSchema#dateTime" } ], "http://purl.org/dc/terms/creator": [ { "@id": "https://orcid.org/0009-0007-4948-9192" } ], "http://purl.org/dc/terms/license": [ { "@id": "https://creativecommons.org/licenses/by/4.0/" } ], "http://purl.org/nanopub/x/hasNanopubType": [ { "@id": "https://w3id.org/delphi/ontology/Assessment" } ], "http://purl.org/nanopub/x/introduces": [ { "@id": "https://w3id.org/delphi/resource/assessment/aristotle-ha04-17--claim-test" } ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Claim test of aristotle-ha04-17: inconclusive, confidence 0.76" } ], "https://w3id.org/delphi/ontology/domain": [ { "@id": "https://w3id.org/delphi/resource/domain/aristotle-biology" } ] }, { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/sig", "http://purl.org/nanopub/x/hasAlgorithm": [ { "@value": "RSA" } ], "http://purl.org/nanopub/x/hasPublicKey": [ { "@value": "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAyFHtPB6p0mCjDozxlOY9CmO3nBm7Te3jFbXyLmM+G1tGe47Da0jYIbhkl9Oo1ZjxmCa3LCwlEqK8gj6hEIcL4ahW30JXh9HycfKVk1bugkzMEV15tJdTzAU3sGMFnbNsn43xY2LFLy45tApkRm5byEiM7oRRrooIdwoQKnP4Wzq/bfAoJ9qvW+MGkelyOTd1jbSt+KfmT7xKmDfWzAHddUlWwMX2QJOLxDaffOteTop6ZRgPiNmPJKA/S62Gac9XtSYT3oDkZ6/nr5cxxNLpOyxTf5FPISiCe11xYO/unYjY+mwnOfA8yhJIyx1l0O9I0vpOpn+E5TvyHJV+oSTrvwIDAQAB" } ], "http://purl.org/nanopub/x/hasSignature": [ { "@value": "UtFo2xlnbNc2Ef0oePzKkeJuBjvV0Y9FuKgK9biWhpf7Et/vZQG87K34xWix3wfsOiydN3hmFN1+8haABIX7IZSYpGB2Z0K9LgM+RfKARGUnO5Vww1o4BuN5spO31jiTVRWihyAWDZDjiwGDRnxvz+9oQXILorYiQ6pj0E96zAFKb1zT28r3Pgh2Jo3y5QfAGCURtJ5EZWcPp6WdHilXv2SGD7rKjetomrysw05w5PfbesRXPPhl0Zjv0Y+5mPoeplUhEs8abTcnbCCUvJ/Ku/QARzgmwzOcN0slxzfDwHEExM6UXrrvchTUTbmSiuz7UiqSo8eTIf4kNLroPuyvEA==" } ], "http://purl.org/nanopub/x/hasSignatureTarget": [ { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw" } ], "http://purl.org/nanopub/x/signedBy": [ { "@id": "https://orcid.org/0009-0007-4948-9192" } ] } ] }, { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/assertion", "@graph": [ { "@id": "https://w3id.org/delphi/resource/assessment/aristotle-ha04-17--claim-test", "http://purl.org/dc/terms/description": [ { "@value": "analysis.py downloads the AnAge zip and the PanTHERIA text file and reads only the header line of each. It lists columns whose names contain 'eye', and separately looks for a structure term: retina, lens, optic, subcutaneous, eyeball, eyelid, cornea, or visible. Age at eye opening matches the first list and not the second. No Talpa row is read. With no structure column, the pre-registered verdict is inconclusive, reason data-unavailable." } ], "@type": [ "https://w3id.org/delphi/ontology/Assessment" ], "http://www.w3.org/2000/01/rdf-schema#comment": [ { "@value": "Measured: null null (n = 0). Interpretation: Aristotle's mole, in the Greek fauna of the History of Animals, is read as Talpa, not as the blind mole-rat Spalax. Visible means an external opening or an eye that can be seen without cutting the skin. Stunted eyes under the skin are present if the table codes an eye beneath the skin. Ordinary parts means the table names lens, retina, and optic nerve, or states that the covered eye contains the ordinary parts. Body-mass and longevity columns do not test the claim." } ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Claim test of aristotle-ha04-17: inconclusive, confidence 0.76" } ], "http://www.w3.org/2000/01/rdf-schema#seeAlso": [ { "@id": "https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-ha04-17/result.json" } ], "http://www.w3.org/ns/prov#wasAttributedTo": [ { "@id": "https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7" } ], "https://w3id.org/delphi/ontology/admissibleDatasets": [ { "@value": "A public species-level table that codes external visibility of the eye and the parts present under the skin, for Talpa. Trait tables that have no eye column, and records of mole-rats, are not admissible as support or refutation." } ], "https://w3id.org/delphi/ontology/assessmentType": [ { "@value": "claim-test/0.1.0" } ], "https://w3id.org/delphi/ontology/dataKind": [ { "@value": "none" } ], "https://w3id.org/delphi/ontology/disconfirmingObservation": [ { "@value": "A scored Talpa species with an externally visible eye, or a covered eye coded as lacking lens, retina, or optic nerve." } ], "https://w3id.org/delphi/ontology/evidenceAgainst": [ { "@value": "No Talpa species was scored. This is not a finding about what is under a mole's skin." }, { "@value": "PanTHERIA column 2-1_AgeatEyeOpening_d is the age, in days, at which the eye opens. It does not code whether a Talpa eye is visible, or whether lens, retina, and optic nerve are present under the skin. No data row was read." }, { "@value": "The Ecological Archives landing page returned a challenge page, so this test does not record a license for PanTHERIA. The table file itself was fetched and hashed." }, { "@value": "The HAGR legal page states that the AnAge work is under a Creative Commons Attribution 3.0 Unported license." } ], "https://w3id.org/delphi/ontology/expectedObservation": [ { "@value": "Each scored Talpa species has no externally visible eye and has a subcutaneous eye that includes lens, retina, and optic nerve." } ], "https://w3id.org/delphi/ontology/failCriterion": [ { "@value": "The claim fails if a scored Talpa species is coded with an eye visible on the intact head, or if a scored covered eye is missing lens, retina, or optic nerve. If the fetched tables have no eye-structure column, the verdict is inconclusive with reason data-unavailable. Records for Spalax or other mole-rats are outside the scope and are not scored. A narrative sentence that is not a species table is not a denominator." } ], "https://w3id.org/delphi/ontology/hasConfidence": [ { "@value": "0.76", "@type": "http://www.w3.org/2001/XMLSchema#double" } ], "https://w3id.org/delphi/ontology/hasEvidence": [ { "@id": "https://w3id.org/delphi/resource/evidence/aristotle-ha04-17--claim-test--dataset-1" }, { "@id": "https://w3id.org/delphi/resource/evidence/aristotle-ha04-17--claim-test--dataset-2" } ], "https://w3id.org/delphi/ontology/hasVerdict": [ { "@value": "inconclusive" } ], "https://w3id.org/delphi/ontology/hypothesis": [ { "@value": "The mole has no visible eyes, but under the skin of the head it has stunted eyes that contain every ordinary part of an eye." } ], "https://w3id.org/delphi/ontology/inferenceMethod": [ { "@value": "Score only rows whose genus is Talpa and only columns that name the eye or its parts. Support requires every such row to lack an external eye and to retain lens, retina, and optic nerve. Any scored row that violates either clause refutes. No eye column is inconclusive, reason data-unavailable." } ], "https://w3id.org/delphi/ontology/passCriterion": [ { "@value": "A species-level table for Talpa, or for moles in Talpidae if the table does not separate Talpa, must code two things: whether an eye is visible on the intact head, and which ordinary parts (at least lens, retina, and optic nerve, or an explicit 'all ordinary parts') are present under the skin. The claim passes if every scored Talpa species is coded as eyes not visible externally and as having those parts under the skin, with at least 1 species fully scored. A table that only says 'reduced eyes' without the parts does not pass." } ], "https://w3id.org/delphi/ontology/preregistered": [ { "@value": "false", "@type": "http://www.w3.org/2001/XMLSchema#boolean" } ] }, { "@id": "https://w3id.org/delphi/resource/evidence/aristotle-ha04-17--claim-test--dataset-1", "http://purl.org/dc/terms/description": [ { "@value": "Header only. Thirty-one life-history columns. None names the eye." } ], "http://purl.org/dc/terms/license": [ { "@value": "CC BY 3.0" } ], "@type": [ "https://w3id.org/delphi/ontology/EvidenceItem" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Dataset: AnAge Build 15 species table (Human Ageing Genomic Resources)" } ], "http://www.w3.org/ns/prov#atLocation": [ { "@id": "https://genomics.senescence.info/species/dataset.zip" } ], "http://www.w3.org/ns/prov#wasDerivedFrom": [ { "@id": "https://genomics.senescence.info/species/" } ], "https://w3id.org/delphi/ontology/hasChecksum": [ { "@value": "sha256:e3ddb66e32e973a79932859ba53013e8f60d957c6ec01c6eb573e3ea3018d630" } ] }, { "@id": "https://w3id.org/delphi/resource/evidence/aristotle-ha04-17--claim-test--dataset-2", "http://purl.org/dc/terms/description": [ { "@value": "Header only. Fifty-five columns. The only eye-named column is age at eye opening, in days, which is not eye structure." } ], "http://purl.org/dc/terms/license": [ { "@value": "" } ], "@type": [ "https://w3id.org/delphi/ontology/EvidenceItem" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Dataset: PanTHERIA 1.0 life-history and ecology table" } ], "http://www.w3.org/ns/prov#atLocation": [ { "@id": "https://esapubs.org/archive/ecol/E090/184/PanTHERIA_1-0_WR05_Aug2008.txt" } ], "http://www.w3.org/ns/prov#wasDerivedFrom": [ { "@id": "https://esapubs.org/archive/ecol/E090/184/" } ], "https://w3id.org/delphi/ontology/hasChecksum": [ { "@value": "sha256:36e64314cae0394a966a63b949504d1975ac5c5629e05e36c1b139b3348f044a" } ] }, { "@id": "https://w3id.org/delphi/resource/claim/aristotle-ha04-17", "https://w3id.org/delphi/ontology/hasAssessment": [ { "@id": "https://w3id.org/delphi/resource/assessment/aristotle-ha04-17--claim-test" } ] } ] }, { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/Head", "@graph": [ { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw", "http://www.nanopub.org/nschema#hasAssertion": [ { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/assertion" } ], "http://www.nanopub.org/nschema#hasProvenance": [ { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo": [ { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/pubinfo" } ], "@type": [ "http://www.nanopub.org/nschema#Nanopublication" ] } ] }, { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/provenance", "@graph": [ { "@id": "https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7", "@type": [ "http://www.w3.org/ns/prov#SoftwareAgent" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "delphisci claim tester (Grok 4.7; cursor/aristotle-life-history-c-7ef1)" } ], "http://www.w3.org/ns/prov#actedOnBehalfOf": [ { "@id": "https://orcid.org/0009-0007-4948-9192" } ], "https://w3id.org/delphi/ontology/usesModel": [ { "@id": "https://w3id.org/delphi/resource/model/grok-4-7" } ] }, { "@id": "https://w3id.org/delphi/resource/model/grok-4-7", "http://purl.org/dc/terms/identifier": [ { "@value": "Grok 4.7" } ], "@type": [ "https://w3id.org/delphi/ontology/LanguageModel" ] }, { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/assertion", "http://www.w3.org/ns/prov#wasAttributedTo": [ { "@id": "https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7" } ], "http://www.w3.org/ns/prov#wasDerivedFrom": [ { "@id": "https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-ha04-17/result.json" } ], "http://www.w3.org/ns/prov#wasGeneratedBy": [ { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/test" } ] }, { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/test", "@type": [ "http://www.w3.org/ns/prov#Activity" ], "http://www.w3.org/ns/prov#qualifiedAssociation": [ { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/plan" } ], "http://www.w3.org/ns/prov#wasAssociatedWith": [ { "@id": "https://w3id.org/delphi/resource/agent/delphisci-claim-tester-grok-4-7" } ] }, { "@id": "https://w3id.org/np/RADMdjSMxl_spFRmeuP3BqE6WKrYII2MLuPHmMkSvSmYw/plan", "http://www.w3.org/ns/prov#hadPlan": [ { "@id": "https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/README.md" } ] } ] } ]