@prefix this: <https://w3id.org/np/RA7CMwc_xmkJol6-lAWPksEP8N76PjhQVTsywLub3rJvI> .
@prefix sub: <https://w3id.org/np/RA7CMwc_xmkJol6-lAWPksEP8N76PjhQVTsywLub3rJvI/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix dc: <http://purl.org/dc/terms/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  <https://w3id.org/delphi/resource/assessment/morgan1915-10--claim-test> a <https://w3id.org/delphi/ontology/Assessment>;
    dc:description "Plants: CCDB countsFull by genus, rows filtered to the species' resolved name, modal parsed_n. Animals: NCBI Datasets reference (or first chromosome-level) assembly, assembled nuclear chromosomes counted from the sequence report, n = autosomes + X.";
    <http://www.w3.org/2000/01/rdf-schema#comment> "Measured: 7 1915 counts matching the modern haploid number (n = 12, 5 differ, 1 unresolved). Interpretation: A compound claim of thirteen numbers; by the project rule it is true only if every part is. 'Man, probably, 24' was the accepted count until 1956. Where a 1915 vernacular name could denote more than one species (wheat, nightshade, cotton) the modern species named above is the primary and alternatives are reported.";
    <http://www.w3.org/2000/01/rdf-schema#label> "Claim test of morgan1915-10: refutes, confidence 0.9";
    <http://www.w3.org/2000/01/rdf-schema#seeAlso> <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/evolution-after-darwin/morgan1915-10/result.json>;
    prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-claude-fable-5-1>;
    <https://w3id.org/delphi/ontology/admissibleDatasets> "Planned datasets: ccdb-and-ncbi-chromosome-counts";
    <https://w3id.org/delphi/ontology/assessmentType> "claim-test/0.1.0";
    <https://w3id.org/delphi/ontology/dataKind> "biological";
    <https://w3id.org/delphi/ontology/disconfirmingObservation> "Two or more resolved species differ from the 1915 number: refutes. Exactly one differs: mixed. Fewer than 9 of 13 resolvable: inconclusive. Species resolution: Helix hortensis = Cepaea hortensis; potato beetle = Leptinotarsa decemlineata; cotton = Gossypium hirsutum; four-o'clock = Mirabilis jalapa; garden pea = Pisum sativum; corn = Zea mays; evening primrose = Oenothera biennis; nightshade = Solanum nigrum; tobacco = Nicotiana tabacum; tomato = Solanum lycopersicum; wheat = Triticum aestivum (bread wheat; einkorn and durum reported alongside).";
    <https://w3id.org/delphi/ontology/evidenceAgainst> "A compound claim of thirteen numbers; by the project rule it is true only if every part is, so the verdict reports the list as a whole and `extra.rows` reports each species.",
      "CCDB modal counts mix cytotypes; a species with several ploidy levels can carry more than one n.",
      "Several 1915 vernacular names are ambiguous (wheat, nightshade, cotton); the primary species is the one named in the pre-registration and alternatives are reported.";
    <https://w3id.org/delphi/ontology/expectedObservation> "Each species resolved to a modern haploid count (CCDB modal gametophytic count for plants; NCBI reference-assembly chromosome count, autosomes plus one X, for animals). All resolved species match the 1915 number: supports.";
    <https://w3id.org/delphi/ontology/failCriterion> "Two or more resolved species differ from the 1915 number: refutes. Exactly one differs: mixed. Fewer than 9 of 13 resolvable: inconclusive. Species resolution: Helix hortensis = Cepaea hortensis; potato beetle = Leptinotarsa decemlineata; cotton = Gossypium hirsutum; four-o'clock = Mirabilis jalapa; garden pea = Pisum sativum; corn = Zea mays; evening primrose = Oenothera biennis; nightshade = Solanum nigrum; tobacco = Nicotiana tabacum; tomato = Solanum lycopersicum; wheat = Triticum aestivum (bread wheat; einkorn and durum reported alongside).";
    <https://w3id.org/delphi/ontology/hasConfidence> "0.9"^^xsd:double;
    <https://w3id.org/delphi/ontology/hasEvidence> <https://w3id.org/delphi/resource/evidence/morgan1915-10--claim-test--dataset-1>;
    <https://w3id.org/delphi/ontology/hasVerdict> "refutes";
    <https://w3id.org/delphi/ontology/hypothesis> "If the thirteen haploid chromosome counts reported in 1915 are right, modern counts agree with each: Helix hortensis 22, potato beetle 18, man 24, mouse 20, cotton 28, four-o'clock 16, garden pea 7, corn 20, evening primrose 7, nightshade 36, tobacco 24, tomato 12, wheat 8.";
    <https://w3id.org/delphi/ontology/inferenceMethod> "Plants: CCDB countsFull by genus, rows filtered to the species' resolved name, modal parsed_n. Animals: NCBI Datasets reference (or first chromosome-level) assembly, assembled nuclear chromosomes counted from the sequence report, n = autosomes + X.";
    <https://w3id.org/delphi/ontology/passCriterion> "Each species resolved to a modern haploid count (CCDB modal gametophytic count for plants; NCBI reference-assembly chromosome count, autosomes plus one X, for animals). All resolved species match the 1915 number: supports.";
    <https://w3id.org/delphi/ontology/preregistered> "true"^^xsd:boolean .
  
  <https://w3id.org/delphi/resource/claim/morgan1915-10> <https://w3id.org/delphi/ontology/hasAssessment>
      <https://w3id.org/delphi/resource/assessment/morgan1915-10--claim-test> .
  
  <https://w3id.org/delphi/resource/evidence/morgan1915-10--claim-test--dataset-1> a
      <https://w3id.org/delphi/ontology/EvidenceItem>;
    dc:description "";
    dc:license "CCDB CC BY; NCBI public domain";
    <http://www.w3.org/2000/01/rdf-schema#label> "Dataset: Chromosome Counts Database (CCDB) countsFull API and NCBI Datasets v2 genome and sequence reports";
    prov:atLocation <https://api.ncbi.nlm.nih.gov/datasets/v2/genome/accession/GCA_024712935.1/sequence_reports?role_filters=assembled-molecule&page_size=1000>,
      <https://api.ncbi.nlm.nih.gov/datasets/v2/genome/accession/GCF_000001405.40/sequence_reports?role_filters=assembled-molecule&page_size=1000>,
      <https://api.ncbi.nlm.nih.gov/datasets/v2/genome/accession/GCF_000001635.27/sequence_reports?role_filters=assembled-molecule&page_size=1000>,
      <https://api.ncbi.nlm.nih.gov/datasets/v2/genome/taxon/10090/dataset_report?filters.reference_only=true&filters.assembly_level=chromosome&filters.assembly_level=complete_genome>,
      <https://api.ncbi.nlm.nih.gov/datasets/v2/genome/taxon/6531/dataset_report?filters.assembly_level=chromosome&filters.assembly_level=complete_genome>,
      <https://api.ncbi.nlm.nih.gov/datasets/v2/genome/taxon/6531/dataset_report?filters.reference_only=true&filters.assembly_level=chromosome&filters.assembly_level=complete_genome>,
      <https://api.ncbi.nlm.nih.gov/datasets/v2/genome/taxon/7539/dataset_report?filters.assembly_level=chromosome&filters.assembly_level=complete_genome>,
      <https://api.ncbi.nlm.nih.gov/datasets/v2/genome/taxon/7539/dataset_report?filters.reference_only=true&filters.assembly_level=chromosome&filters.assembly_level=complete_genome>,
      <https://api.ncbi.nlm.nih.gov/datasets/v2/genome/taxon/9606/dataset_report?filters.reference_only=true&filters.assembly_level=chromosome&filters.assembly_level=complete_genome>,
      <https://ccdb.tau.ac.il/services/countsFull/?genus=Gossypium&format=json>, <https://ccdb.tau.ac.il/services/countsFull/?genus=Mirabilis&format=json>,
      <https://ccdb.tau.ac.il/services/countsFull/?genus=Nicotiana&format=json>, <https://ccdb.tau.ac.il/services/countsFull/?genus=Oenothera&format=json>,
      <https://ccdb.tau.ac.il/services/countsFull/?genus=Pisum&format=json>, <https://ccdb.tau.ac.il/services/countsFull/?genus=Solanum&format=json>,
      <https://ccdb.tau.ac.il/services/countsFull/?genus=Triticum&format=json>, <https://ccdb.tau.ac.il/services/countsFull/?genus=Zea&format=json>;
    prov:wasDerivedFrom <https://ccdb.tau.ac.il/>;
    <https://w3id.org/delphi/ontology/hasChecksum> "sha256:0f144a7c8aa3a864ed741791928c6c2bb1f74363b59c5913a3140fe2a25486d9",
      "sha256:1435b3792ee9ce43b7569624034e5124da11ab7d74513c8463e86ea9e24df6dc", "sha256:21e7ef981b470f6853c9ffc430679f2a8ce0878cf7e6deb6279295561f7b55a2",
      "sha256:2ac51ff15031aaba84713cad7290e1341ce324709e8f92f1a50093bd6292faea", "sha256:3b2ae0a2d7269f4850347ee16957b710f250af0de4987ed3a986de3005d100c8",
      "sha256:3c35ae26fb98bc265db23082eb56a42c9dc36285d4239cbc6c1e73784756e2c4", "sha256:44136fa355b3678a1146ad16f7e8649e94fb4fc21fe77e8310c060f61caaff8a",
      "sha256:53289366a0cee7e6d49ba375ba5cbfb0165a8069df0b2fe38472393bf28799d7", "sha256:6ea35dc815c7666a3c1d9e38e3832f7589c65b5ac5419f831172aa47782c4171",
      "sha256:792aadf8651a2eb7198f5df431ed20a7e0259a0d47d1ff79ba032831bb9365e1", "sha256:8ead23d1d4c90b84dd1b0f2eb1140ba06b210791a45631039cfa78532cc06aad",
      "sha256:9160fbc6c916c12172268b9ba94ed5264440a40aa9008d13a1e48425676a51da", "sha256:ada2463bf8efbdb1222fb441770ecefabec2b05c8d1289c4a63a79b7bcb8e841",
      "sha256:d87c8e0b894de44674d2622b431798f32fd339f0811ba76e379302f02bf30814", "sha256:dda8bdfc7ba985e20c99113eaf0c71ea215e3334312132236967214fcc6ffd7d" .
}

sub:provenance {
  <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-claude-fable-5-1> a
      prov:SoftwareAgent;
    <http://www.w3.org/2000/01/rdf-schema#label> "delphisci claim tester (claude-fable-5.1; evolution-after-darwin-tests-1)";
    prov:actedOnBehalfOf <https://orcid.org/0009-0007-4948-9192>;
    <https://w3id.org/delphi/ontology/usesModel> <https://w3id.org/delphi/resource/model/claude-fable-5-1> .
  
  <https://w3id.org/delphi/resource/model/claude-fable-5-1> a <https://w3id.org/delphi/ontology/LanguageModel>;
    dc:identifier "claude-fable-5.1" .
  
  sub:assertion prov:wasAttributedTo <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-claude-fable-5-1>;
    prov:wasDerivedFrom <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/evolution-after-darwin/morgan1915-10/result.json>;
    prov:wasGeneratedBy sub:test .
  
  sub:plan prov:hadPlan <https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/README.md> .
  
  sub:test a prov:Activity;
    prov:qualifiedAssociation sub:plan;
    prov:wasAssociatedWith <https://w3id.org/delphi/resource/agent/delphisci-claim-tester-claude-fable-5-1> .
}

sub:pubinfo {
  this: dc:created "2026-11-08T16:24:31.868Z"^^xsd:dateTime;
    dc:creator <https://orcid.org/0009-0007-4948-9192>;
    dc:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:hasNanopubType <https://w3id.org/delphi/ontology/Assessment>;
    npx:introduces <https://w3id.org/delphi/resource/assessment/morgan1915-10--claim-test>;
    <http://www.w3.org/2000/01/rdf-schema#label> "Claim test of morgan1915-10: refutes, confidence 0.9";
    <https://w3id.org/delphi/ontology/domain> <https://w3id.org/delphi/resource/domain/evolution-after-darwin> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAyFHtPB6p0mCjDozxlOY9CmO3nBm7Te3jFbXyLmM+G1tGe47Da0jYIbhkl9Oo1ZjxmCa3LCwlEqK8gj6hEIcL4ahW30JXh9HycfKVk1bugkzMEV15tJdTzAU3sGMFnbNsn43xY2LFLy45tApkRm5byEiM7oRRrooIdwoQKnP4Wzq/bfAoJ9qvW+MGkelyOTd1jbSt+KfmT7xKmDfWzAHddUlWwMX2QJOLxDaffOteTop6ZRgPiNmPJKA/S62Gac9XtSYT3oDkZ6/nr5cxxNLpOyxTf5FPISiCe11xYO/unYjY+mwnOfA8yhJIyx1l0O9I0vpOpn+E5TvyHJV+oSTrvwIDAQAB";
    npx:hasSignature "uhJsir/cqTV08dmSVTQLI32qmQKy73P5NP6FXMP/Gx3Q0dBtEJY7mkrPc8J7CxwmX2aC+v3Kuoiu/oo3Ra7fZTUWYjtPPwRhfzgXhnh3XSqDAaxalK649LShm69rht4WbJ3GCq7R08xO6YX5oFoQw0wyWOZ1hDz1t+Re8aRzWufSMDHMQU8G8ppjROiND2SiTEYFNWHxJM8HrP0pJc/IHoxsBwL/7T41/QE8cimJMgpnrPvkjH2ywfmA5PVah65RX7uCb7PUG7Yrri6yMANoZp6fLWk5VZALxVPh8JiwUu8R6CEVaFYHgtqefzdoPNz+6k+NgWURVa3U0NXVRkP7iw==";
    npx:hasSignatureTarget this:;
    npx:signedBy <https://orcid.org/0009-0007-4948-9192> .
}