rows { options { physical_type: PHYSICAL_STREAM_TYPE_QUADS max_name_table_size: 128 max_prefix_table_size: 16 max_datatype_table_size: 16 logical_type: LOGICAL_STREAM_TYPE_DATASETS version: 2 } } rows { prefix { value: "https://w3id.org/np/" } } rows { name { value: "RA77X7Mw1enydjvaGzjCKLsJ2zufsiRw-a_9UN2NjaXEs" } } rows { namespace { name: "this" value { prefix_id: 1 } } } rows { prefix { value: "https://w3id.org/np/RA77X7Mw1enydjvaGzjCKLsJ2zufsiRw-a_9UN2NjaXEs/" } } rows { name { } } rows { namespace { name: "sub" value { prefix_id: 2 } } } rows { prefix { value: "http://www.nanopub.org/nschema#" } } rows { namespace { name: "np" value { prefix_id: 3 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/1999/02/22-rdf-syntax-ns#" } } rows { namespace { name: "rdf" value { prefix_id: 4 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/ns/prov#" } } rows { namespace { name: "prov" value { prefix_id: 5 name_id: 2 } } } rows { prefix { value: "http://purl.org/nanopub/x/" } } rows { namespace { name: "npx" value { prefix_id: 6 name_id: 2 } } } rows { prefix { value: "http://purl.org/dc/terms/" } } rows { namespace { name: "dc" value { prefix_id: 7 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/2001/XMLSchema#" } } rows { namespace { name: "xsd" value { prefix_id: 8 name_id: 2 } } } rows { name { value: "hasAssertion" } } rows { name { value: "assertion" } } rows { name { value: "Head" } } rows { quad { s_iri { prefix_id: 1 name_id: 1 } p_iri { prefix_id: 3 name_id: 3 } o_iri { prefix_id: 2 } g_iri { } } } rows { name { value: "hasProvenance" } } rows { name { value: "provenance" } } rows { quad { p_iri { prefix_id: 3 } o_iri { prefix_id: 2 } } } rows { name { value: "hasPublicationInfo" } } rows { name { value: "pubinfo" } } rows { quad { p_iri { prefix_id: 3 } o_iri { prefix_id: 2 } } } rows { name { value: "type" } } rows { name { value: "Nanopublication" } } rows { quad { p_iri { prefix_id: 4 } o_iri { prefix_id: 3 } } } rows { prefix { value: "https://w3id.org/delphi/resource/assessment/" } } rows { name { value: "darwin1859-ch09-05--claim-test" } } rows { name { value: "description" } } rows { quad { s_iri { prefix_id: 9 } p_iri { prefix_id: 7 } o_literal { lex: "The Macrostrat project named \'North America\' (id 1) was selected by name. Of 949 columns, those with col_id % 5 == 1 were taken in ascending id order, capped at 200 (189 requested). Each column\'s sections were downloaded. A package counts only when 0 < b_age - t_age < 250 Ma. Columns need at least four such packages and a span of at least 20 Ma (156 eligible, 1105 pairs). Gaps are older.t_age - younger.b_age after ordering by midpoint age, floored at 0. Wide means the gap exceeds the mean of the two package durations. The chief-cause proxy is a column whose gaps sum to more time than its packages. Median ratio 0.8099716620805785, wide-pair fraction 0.4452488687782805, chief-proxy fraction 0.7051282051282052." } g_iri { prefix_id: 2 name_id: 4 } } } rows { prefix { value: "https://w3id.org/delphi/ontology/" } } rows { name { value: "Assessment" } } rows { quad { p_iri { prefix_id: 4 name_id: 10 } o_iri { prefix_id: 10 name_id: 14 } } } rows { prefix { value: "http://www.w3.org/2000/01/rdf-schema#" } } rows { name { value: "comment" } } rows { quad { p_iri { prefix_id: 11 } o_literal { lex: "Measured: 0.809972 median gap / mean adjacent package duration (n = 156). Interpretation: Full quote (Origin, 1st ed., ch. IX): \"But the imperfection in the geological record mainly results from another and more important cause than any of the foregoing; namely, from the several formations being separated from each other by wide intervals of time.\" Darwin has just listed other causes (soft bodies, non-deposition, dissolution, sparse terrestrial preservation). Those causes are not fields in the dataset, so \'mainly\' / \'chief\' is scored only by the proxy declared in the pass criterion, and the verdict does not claim to have ranked causes. Scope is narrower than worldwide: North American columns, which Darwin names as an example (\'so it is in North America\'). A formation is a Macrostrat gap-bound package (the sections endpoint). Package duration is b_age minus t_age, in Ma. Packages are ordered by midpoint age, oldest first. The gap between an older package and the next younger one is older.t_age minus younger.b_age, and negative values (overlaps) are set to 0 so an overlap is not an interval of separation. A gap is wide when it exceeds the mean duration of the two packages it separates. Zero gaps stay in the median and in the wide-pair fraction. Eligible column: at least four packages with 0 < duration < 250 Ma, and column span (maximum b_age minus minimum t_age) >= 20 Ma. Subsample, fixed before any section is read: columns of the project whose name is North America, keep col_id modulo 5 equals 1, ascending col_id, at most 200 columns." } } } rows { name { value: "label" } } rows { quad { p_iri { } o_literal { lex: "Claim test of darwin1859-ch09-05: mixed, confidence 0.5" } } } rows { name { value: "seeAlso" } } rows { prefix { value: "https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/darwin-origin/darwin1859-ch09-05/" } } rows { name { value: "result.json" } } rows { quad { p_iri { } o_iri { prefix_id: 12 } } } rows { name { value: "wasAttributedTo" } } rows { prefix { value: "https://w3id.org/delphi/resource/agent/" } } rows { name { value: "delphisci-claim-tester-grok-4-7" } } rows { quad { p_iri { prefix_id: 5 } o_iri { prefix_id: 13 } } } rows { name { value: "admissibleDatasets" } } rows { quad { p_iri { prefix_id: 10 } o_literal { lex: "A public column-level rock record with numeric top and base ages of successive packages, so hiatus length can be derived. A dataset that only lists fossil collections, with no package boundaries, is not admissible. Licence must allow reuse." } } } rows { name { value: "assessmentType" } } rows { quad { p_iri { } o_literal { lex: "claim-test/0.1.0" } } } rows { name { value: "dataKind" } } rows { quad { p_iri { } o_literal { lex: "physical" } } } rows { name { value: "disconfirmingObservation" } } rows { quad { p_iri { } o_literal { lex: "The median gap is shorter than half the neighbouring packages, or gaps dominate the time span in fewer than a quarter of columns." } } } rows { name { value: "evidenceAgainst" } } rows { quad { p_iri { } o_literal { lex: "Macrostrat package boundaries are a compilation\'s gap-bound units, not Darwin\'s named formations one for one." } } } rows { quad { o_literal { lex: "Overlapping age ranges are treated as a gap of zero. Age uncertainty is not propagated; the uncertainty field is null." } } } rows { quad { o_literal { lex: "Present thickness is not used. The test is about time missing between packages." } } } rows { quad { o_literal { lex: "Scope is North American columns with col_id % 5 == 1, not the worldwide record Darwin also asserts." } } } rows { quad { o_literal { lex: "The verdict uses a temporal-dominance proxy for \'mainly\' / \'chief cause\'. Erosion, dissolution, non-deposition versus non-collection, and soft-part loss were not measured, so the proxy does not rank those causes." } } } rows { name { value: "expectedObservation" } } rows { quad { p_iri { } o_literal { lex: "Typical inter-package gaps last at least as long as the packages beside them, and in at least half of the columns the gaps sum to more time than the packages." } } } rows { name { value: "failCriterion" } } rows { quad { p_iri { } o_literal { lex: "Refute if the median gap ratio is < 0.5, or if the fraction of columns in which summed gaps exceed summed package durations is < 0.25. Any other combination that is not a pass is mixed. If fewer than 40 columns are eligible, the verdict is inconclusive with reason underpowered." } } } rows { name { value: "hasConfidence" } } rows { datatype { value: "http://www.w3.org/2001/XMLSchema#double" } } rows { quad { p_iri { } o_literal { lex: "0.5" datatype: 1 } } } rows { name { value: "hasEvidence" } } rows { prefix { value: "https://w3id.org/delphi/resource/evidence/" } } rows { name { value: "darwin1859-ch09-05--claim-test--dataset-1" } } rows { quad { p_iri { } o_iri { prefix_id: 14 } } } rows { name { value: "hasVerdict" } } rows { quad { p_iri { prefix_id: 10 } o_literal { lex: "mixed" } } } rows { name { value: "hypothesis" } } rows { quad { p_iri { } o_literal { lex: "In North American Macrostrat columns, successive gap-bound packages are separated by time gaps that are wide relative to the packages themselves, and those gaps take up more time than the packages do." } } } rows { name { value: "inferenceMethod" } } rows { quad { p_iri { } o_literal { lex: "Median gap ratio, fraction of wide pairs, and fraction of columns with summed gaps greater than summed durations, on the pre-registered North American subsample. Thresholds are 1, 0.50 and 0.50 for a pass. The column fraction is a temporal-dominance proxy for \'chief cause\', not a causal attribution." } } } rows { name { value: "passCriterion" } } rows { quad { p_iri { } o_literal { lex: "Among eligible columns, all three must hold: the median of gap/mean(adjacent package durations) is >= 1; the fraction of consecutive pairs with gap > mean(adjacent durations) is >= 0.50; and the fraction of columns in which the summed gaps exceed the summed package durations is >= 0.50. That third fraction is the pre-registered proxy for \'chief\' / \'mainly\'. It measures temporal dominance of gaps inside a column. It is not a partition of incompleteness among erosion, non-deposition, preservation and collecting." } } } rows { name { value: "preregistered" } } rows { datatype { value: "http://www.w3.org/2001/XMLSchema#boolean" } } rows { quad { p_iri { } o_literal { lex: "false" datatype: 2 } } } rows { prefix { value: "https://w3id.org/delphi/resource/claim/" } } rows { name { value: "darwin1859-ch09-05" } } rows { name { value: "hasAssessment" } } rows { quad { s_iri { prefix_id: 15 } p_iri { prefix_id: 10 } o_iri { prefix_id: 9 name_id: 12 } } } rows { quad { s_iri { prefix_id: 14 name_id: 30 } p_iri { prefix_id: 7 name_id: 13 } o_literal { lex: "top and base ages of successive packages in North American columns" } } } rows { name { value: "license" } } rows { quad { p_iri { name_id: 38 } o_literal { lex: "CC-BY 4.0" } } } rows { name { value: "EvidenceItem" } } rows { quad { p_iri { prefix_id: 4 name_id: 10 } o_iri { prefix_id: 10 name_id: 39 } } } rows { quad { p_iri { prefix_id: 11 name_id: 16 } o_literal { lex: "Dataset: Macrostrat API v2 gap-bound packages for the North America project" } } } rows { name { value: "atLocation" } } rows { prefix { value: "https://macrostrat.org/api/v2/" } } rows { name { value: "columns?format=json&response=short&project_id=1" } } rows { quad { p_iri { prefix_id: 5 name_id: 40 } o_iri { prefix_id: 16 } } } rows { prefix { id: 6 value: "https://macrostrat.org/api/v2/defs/" } } rows { name { value: "projects?format=json" } } rows { quad { o_iri { prefix_id: 6 } } } rows { name { value: "sections?format=json&col_id=101" } } rows { quad { o_iri { prefix_id: 16 } } } rows { name { value: "sections?format=json&col_id=106" } } rows { quad { o_iri { } } } rows { name { value: "sections?format=json&col_id=11" } } rows { quad { o_iri { } } } rows { name { value: "sections?format=json&col_id=111" } } rows { quad { o_iri { } } } rows { name { value: "sections?format=json&col_id=116" } } rows { quad { o_iri { } } } rows { name { value: 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} } rows { quad { p_iri { } o_iri { prefix_id: 2 name_id: 123 } } } rows { name { value: "wasAssociatedWith" } } rows { quad { p_iri { prefix_id: 5 name_id: 128 } o_iri { prefix_id: 13 name_id: 107 } } } rows { prefix { id: 9 value: "https://w3id.org/np/" } } rows { name { id: 2 value: "RA77X7Mw1enydjvaGzjCKLsJ2zufsiRw-a_9UN2NjaXEs" } } rows { name { id: 1 value: "created" } } rows { datatype { value: "http://www.w3.org/2001/XMLSchema#dateTime" } } rows { name { id: 3 value: "pubinfo" } } rows { quad { s_iri { prefix_id: 9 name_id: 2 } p_iri { prefix_id: 7 name_id: 1 } o_literal { lex: "2026-11-08T16:24:31.816Z" datatype: 3 } g_iri { prefix_id: 2 name_id: 3 } } } rows { name { id: 5 value: "creator" } } rows { quad { p_iri { prefix_id: 7 name_id: 5 } o_iri { prefix_id: 1 name_id: 113 } } } rows { name { value: "license" } } rows { prefix { id: 14 value: "https://creativecommons.org/licenses/by/4.0/" } } rows { quad { p_iri { prefix_id: 7 name_id: 6 } o_iri { prefix_id: 14 name_id: 105 } } } rows { prefix { id: 6 value: "http://purl.org/nanopub/x/" } } rows { name { value: "hasNanopubType" } } rows { name { value: "Assessment" } } rows { quad { p_iri { prefix_id: 6 name_id: 7 } o_iri { prefix_id: 10 } } } rows { name { value: "introduces" } } rows { prefix { id: 16 value: "https://w3id.org/delphi/resource/assessment/" } } rows { name { id: 11 value: "darwin1859-ch09-05--claim-test" } } rows { quad { p_iri { prefix_id: 6 } o_iri { prefix_id: 16 name_id: 11 } } } rows { quad { p_iri { prefix_id: 11 name_id: 111 } o_literal { lex: "Claim test of darwin1859-ch09-05: mixed, confidence 0.5" } } } rows { name { id: 4 value: "domain" } } rows { prefix { id: 8 value: "https://w3id.org/delphi/resource/domain/" } } rows { name { id: 14 value: "darwin-origin-1859" } } rows { quad { p_iri { prefix_id: 10 name_id: 4 } o_iri { prefix_id: 8 name_id: 14 } } } rows { name { value: "sig" } } rows { name { id: 17 value: "hasAlgorithm" } } rows { quad { s_iri { prefix_id: 2 } p_iri { prefix_id: 6 name_id: 17 } o_literal { lex: "RSA" } } } rows { name { value: "hasPublicKey" } } rows { quad { p_iri { } o_literal { lex: "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAyFHtPB6p0mCjDozxlOY9CmO3nBm7Te3jFbXyLmM+G1tGe47Da0jYIbhkl9Oo1ZjxmCa3LCwlEqK8gj6hEIcL4ahW30JXh9HycfKVk1bugkzMEV15tJdTzAU3sGMFnbNsn43xY2LFLy45tApkRm5byEiM7oRRrooIdwoQKnP4Wzq/bfAoJ9qvW+MGkelyOTd1jbSt+KfmT7xKmDfWzAHddUlWwMX2QJOLxDaffOteTop6ZRgPiNmPJKA/S62Gac9XtSYT3oDkZ6/nr5cxxNLpOyxTf5FPISiCe11xYO/unYjY+mwnOfA8yhJIyx1l0O9I0vpOpn+E5TvyHJV+oSTrvwIDAQAB" } } } rows { name { value: "hasSignature" } } rows { quad { p_iri { } o_literal { lex: "s+WjsskQy0OvdnbQO43HtRuGzBlpZBu/lZfqKiaPDef9Y3v3VO/ZldRDooEIv/MyKYuT6MaVA8Y4t6b9MqCOP6teOf+vCqLswAEgkSUCWpNi2WmugXaM+FwlBsK0RS4azHUJ1qJUNmJO6n2EaqApiVS8p1AAalnZJM5zss9EhRIF3O4el178I5VbfPn6iJfCDab4TyZWx5wLkA6zC8rFHKl46Ur9va3Eql6CWPbdcRLHWnYxeC6mtu6lTrQN6cEv8Flbxn86umDCuCchBwNmhCLlZWckzv9dJ0/glhbJ0Ykoy2iGQ1aodnvt/XRFUgrmMtfjxa+bbvCRXIn/a9DgzQ==" } } } rows { name { value: "hasSignatureTarget" } } rows { quad { p_iri { } o_iri { prefix_id: 9 name_id: 2 } } } rows { name { value: "signedBy" } } rows { quad { p_iri { prefix_id: 6 name_id: 21 } o_iri { prefix_id: 1 name_id: 113 } } }