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Queried BioSamples for Gallus gallus, Danio rerio and Anolis carolinensis with the pre-registered organism-part values, and took the value with the largest total. Trachemys scripta is reported and is not required for the verdict. One hit refutes the universal; no hit is inconclusive." } g_iri { prefix_id: 2 name_id: 4 } } } rows { prefix { value: "https://w3id.org/delphi/ontology/" } } rows { name { value: "Assessment" } } rows { quad { p_iri { prefix_id: 4 name_id: 10 } o_iri { prefix_id: 10 name_id: 14 } } } rows { prefix { value: "http://www.w3.org/2000/01/rdf-schema#" } } rows { name { value: "comment" } } rows { quad { p_iri { prefix_id: 11 } o_literal { lex: "Measured: 4 sources or species with a kidney record (n = 14). Interpretation: Feathered animals are represented by the chicken, scaled fishes by the zebrafish, and scaly reptiles that are not tortoises by the green anole. Aristotle allows flattened kidney-like bodies in some birds and still says the kidney is wanting; a structure named kidney, or a pronephros, mesonephros or metanephros, counts as the organ. Tortoises are the stated exception and are queried only as a description. One counterexample refutes a universal absence." } } } rows { name { value: "label" } } rows { quad { p_iri { } o_literal { lex: "Claim test of aristotle-pa03-23 (pr-169): refutes, confidence 0.85" } } } rows { name { value: "seeAlso" } } rows { prefix { value: "https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/aristotle-biology/aristotle-pa03-23/pr-169/" } } rows { name { value: "result.json" } } rows { quad { p_iri { } o_iri { prefix_id: 12 } } } rows { name { value: "wasAttributedTo" } } rows { prefix { value: "https://w3id.org/delphi/resource/agent/" } } rows { name { value: "delphisci-claim-tester-grok-4-7" } } rows { quad { p_iri { prefix_id: 5 } o_iri { prefix_id: 13 } } } rows { name { value: "admissibleDatasets" } } rows { quad { p_iri { prefix_id: 10 } o_literal { lex: "The ZFIN zebrafish anatomy-term download, which lists structures of Danio rerio, and the public EBI BioSamples index filtered by organism and organism part. A sample of an organ is evidence the organ was present in the sampled animal. An ontology or sample index that does not mention an organ is not evidence of absence." } } } rows { name { value: "assessmentType" } } rows { quad { p_iri { } o_literal { lex: "claim-test/0.1.0" } } } rows { name { value: "dataKind" } } rows { quad { p_iri { } o_literal { lex: "biological" } } } rows { name { value: "disconfirmingObservation" } } rows { quad { p_iri { } o_literal { lex: "A curated zebrafish anatomy term naming a kidney, or at least one public biosample of kidney from a chicken, a zebrafish or a green anole." } } } rows { name { value: "evidenceAgainst" } } rows { quad { p_iri { } o_literal { lex: "A biosample of kidney shows that the organ was taken from that species. It is not a survey of every bird and every fish." } } } rows { quad { o_literal { lex: "Aristotle\'s flattened kidney-like bodies in birds are counted as kidneys when the source names them as a kidney or a nephros." } } } rows { quad { o_literal { lex: "No kidney record in these two sources would not establish that kidneys are absent, so that outcome stays inconclusive." } } } rows { quad { o_literal { lex: "ZFIN is the anatomy of the zebrafish, a scaled bony fish, not of every scaled animal." } } } rows { name { value: "expectedObservation" } } rows { quad { p_iri { } o_literal { lex: "No confirming observation is defined. The universal would require coded absence across feathered and scaled animals, which these sources do not provide." } } } rows { name { value: "failCriterion" } } rows { quad { p_iri { } o_literal { lex: "Pre-registered. The claim is refuted if the ZFIN zebrafish anatomy list contains a term whose name is kidney, metanephros, mesonephros or pronephros, or if EBI BioSamples reports at least one sample of Gallus gallus, Danio rerio or Anolis carolinensis whose organism-part value is one of kidney, Kidney, adult kidney or kidney tissue. A tortoise sample is reported and is not required. If both sources are fetched and neither records such a kidney, the verdict is inconclusive with reason other. If both sources fail to return a readable file or response, the verdict is inconclusive with reason data-unavailable." } } } rows { name { value: "hasConfidence" } } rows { datatype { value: "http://www.w3.org/2001/XMLSchema#double" } } rows { quad { p_iri { } o_literal { lex: "0.85" datatype: 1 } } } rows { name { value: "hasEvidence" } } rows { prefix { value: "https://w3id.org/delphi/resource/evidence/" } } rows { name { value: "aristotle-pa03-23--claim-test--pr-169--dataset-1" } } rows { quad { p_iri { } o_iri { prefix_id: 14 } } } rows { name { value: "aristotle-pa03-23--claim-test--pr-169--dataset-2" } } rows { quad { o_iri { } } } rows { name { value: "hasVerdict" } } rows { quad { p_iri { prefix_id: 10 } o_literal { lex: "refutes" } } } rows { name { value: "hypothesis" } } rows { quad { p_iri { } o_literal { lex: "If kidneys are absent from every feathered or scaled animal except tortoises, public anatomy records do not list a kidney for a bird, a bony fish or a lizard." } } } rows { name { value: "inferenceMethod" } } rows { quad { p_iri { } o_literal { lex: "Exact, case-sensitive match of organism-part values in the pre-registered list, and a case-insensitive exact match of ZFIN term names to the four kidney names. 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