https://w3id.org/np/RA0iXYk6xka0d59w2nUCvAHrSWQVyQnawCTFBSmaNgYHo/Head https://w3id.org/np/RA0iXYk6xka0d59w2nUCvAHrSWQVyQnawCTFBSmaNgYHo http://www.nanopub.org/nschema#hasAssertion https://w3id.org/np/RA0iXYk6xka0d59w2nUCvAHrSWQVyQnawCTFBSmaNgYHo/assertion https://w3id.org/np/RA0iXYk6xka0d59w2nUCvAHrSWQVyQnawCTFBSmaNgYHo http://www.nanopub.org/nschema#hasProvenance https://w3id.org/np/RA0iXYk6xka0d59w2nUCvAHrSWQVyQnawCTFBSmaNgYHo/provenance https://w3id.org/np/RA0iXYk6xka0d59w2nUCvAHrSWQVyQnawCTFBSmaNgYHo http://www.nanopub.org/nschema#hasPublicationInfo https://w3id.org/np/RA0iXYk6xka0d59w2nUCvAHrSWQVyQnawCTFBSmaNgYHo/pubinfo https://w3id.org/np/RA0iXYk6xka0d59w2nUCvAHrSWQVyQnawCTFBSmaNgYHo http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.nanopub.org/nschema#Nanopublication https://w3id.org/np/RA0iXYk6xka0d59w2nUCvAHrSWQVyQnawCTFBSmaNgYHo/assertion https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test http://purl.org/dc/terms/description fetch.py obtains the two spreadsheets (Dryad serves downloads behind a browser proof-of-work challenge; files were fetched with headless Chrome, checksummed, and a 49 KB derived table committed under derived/). analysis.py keeps heads with a reported head diameter and an adjacent Fibonacci-type pair (photoreviewed counts first, submitter counts otherwise), computes the Spearman correlation between diameter and the larger parastichy number, and compares median diameters across the main-sequence pair classes 21/34, 34/55, 55/89 and 89/144 (Kruskal-Wallis as a supplementary test). https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/delphi/ontology/Assessment https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test http://www.w3.org/2000/01/rdf-schema#comment Measured: 0.6744 Spearman rho, head diameter (cm) vs larger parastichy number (n = 401, P = 1.6e-54; photoreviewed-only subset n = 257, rho = 0.700). Interpretation: Thompson's 'size of the entire structure' is mapped to the diameter of the sunflower seedhead as reported by the grower; 'the arrangement' is mapped to the adjacent Fibonacci-type parastichy pair, ordered by its larger member. Primary counts are the photoreviewed counts where available, otherwise the submitter's counts. The claim's extension to other composites is not tested here; only the sunflower disc, which is Thompson's named example, is. https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test http://www.w3.org/2000/01/rdf-schema#label Claim test of thompson1917-ch14-05: supports, confidence 0.9 https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test http://www.w3.org/2000/01/rdf-schema#seeAlso https://github.com/fractastical/delphisci/blob/bf2af6ee0a84e23ffa6414ad7a0a50a8c276506e/test-data/claim-tests/thompson-growth-form/thompson1917-ch14-05/result.json https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test http://www.w3.org/ns/prov#wasAttributedTo https://w3id.org/delphi/resource/agent/delphisci-claim-tester-claude-fable-5-1-thinking-high https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/admissibleDatasets Planned datasets: turings-sunflowers-dryad-f9k77 https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/assessmentType claim-test/0.1.0 https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/dataKind biological https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/disconfirmingObservation Pre-registered. rho <= 0.10, or P >= 0.05, or an inversion of median diameter between adjacent main-sequence pair classes each with n >= 10 (larger pair at smaller heads). 0.10 < rho < 0.30 with P < 0.05 and no inversion is 'mixed'. If the data file carries no head-size measurement, the verdict is 'inconclusive' with reason 'data-unavailable'; if fewer than 50 heads have both diameter and a resolved pair, 'inconclusive' with reason 'underpowered'. https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/evidenceAgainst Head diameter was measured and reported by the growers themselves (citizen science), with unknown precision and probably mixed conventions (disc versus whole head); such noise biases the correlation towards zero, not away from it. https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/evidenceAgainst Size and developmental stage are confounded in a cross-sectional sample; the claim is about size, and that is what was measured. https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/evidenceAgainst The sample is cultivated Helianthus annuus of many cultivars; the claim's remark about other composites is not tested. https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/evidenceAgainst Thompson lists 34/55, 55/89 and 89/144 as occurring in one species; here the 89/144 class has only 11 heads, though their median diameter (24 cm) is well above the 55/89 class (14 cm). https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/expectedObservation Pre-registered. In the Turing's Sunflowers data (Helianthus annuus), restrict to heads with a recorded head (seedhead) diameter and with both parastichy counts forming an adjacent pair of a Fibonacci-type sequence (Fibonacci, Lucas, double Fibonacci or F4, as defined by Swinton et al. 2016). The Spearman rank correlation between head diameter and the larger parastichy number must be positive with rho >= 0.30 and P < 0.01, and the median head diameter must increase monotonically across successive pair classes of the main Fibonacci sequence that each have n >= 10 heads. https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/failCriterion Pre-registered. rho <= 0.10, or P >= 0.05, or an inversion of median diameter between adjacent main-sequence pair classes each with n >= 10 (larger pair at smaller heads). 0.10 < rho < 0.30 with P < 0.05 and no inversion is 'mixed'. If the data file carries no head-size measurement, the verdict is 'inconclusive' with reason 'data-unavailable'; if fewer than 50 heads have both diameter and a resolved pair, 'inconclusive' with reason 'underpowered'. https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/hasConfidence 0.9 https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/hasEvidence https://w3id.org/delphi/resource/evidence/thompson1917-ch14-05--claim-test--dataset-1 https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/hasVerdict supports https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/hypothesis Within one species of sunflower, larger capitula carry higher parastichy pairs: head diameter increases in order across the successive Fibonacci pairs (e.g. 21/34 < 34/55 < 55/89 < 89/144), so parastichy numbers rise with the size of the whole structure. https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/inferenceMethod fetch.py obtains the two spreadsheets (Dryad serves downloads behind a browser proof-of-work challenge; files were fetched with headless Chrome, checksummed, and a 49 KB derived table committed under derived/). analysis.py keeps heads with a reported head diameter and an adjacent Fibonacci-type pair (photoreviewed counts first, submitter counts otherwise), computes the Spearman correlation between diameter and the larger parastichy number, and compares median diameters across the main-sequence pair classes 21/34, 34/55, 55/89 and 89/144 (Kruskal-Wallis as a supplementary test). https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/passCriterion Pre-registered. In the Turing's Sunflowers data (Helianthus annuus), restrict to heads with a recorded head (seedhead) diameter and with both parastichy counts forming an adjacent pair of a Fibonacci-type sequence (Fibonacci, Lucas, double Fibonacci or F4, as defined by Swinton et al. 2016). The Spearman rank correlation between head diameter and the larger parastichy number must be positive with rho >= 0.30 and P < 0.01, and the median head diameter must increase monotonically across successive pair classes of the main Fibonacci sequence that each have n >= 10 heads. https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/ontology/preregistered false https://w3id.org/delphi/resource/claim/thompson1917-ch14-05 https://w3id.org/delphi/ontology/hasAssessment https://w3id.org/delphi/resource/assessment/thompson1917-ch14-05--claim-test https://w3id.org/delphi/resource/evidence/thompson1917-ch14-05--claim-test--dataset-1 http://purl.org/dc/terms/description head diameter and parastichy pair for Helianthus annuus heads https://w3id.org/delphi/resource/evidence/thompson1917-ch14-05--claim-test--dataset-1 http://purl.org/dc/terms/license CC0 1.0 https://w3id.org/delphi/resource/evidence/thompson1917-ch14-05--claim-test--dataset-1 http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/delphi/ontology/EvidenceItem https://w3id.org/delphi/resource/evidence/thompson1917-ch14-05--claim-test--dataset-1 http://www.w3.org/2000/01/rdf-schema#label Dataset: Data from: Novel Fibonacci and non-Fibonacci structure in the sunflower: results of a citizen science experiment (Turing's Sunflowers) https://w3id.org/delphi/resource/evidence/thompson1917-ch14-05--claim-test--dataset-1 http://www.w3.org/ns/prov#atLocation https://datadryad.org/downloads/file_stream/4662 https://w3id.org/delphi/resource/evidence/thompson1917-ch14-05--claim-test--dataset-1 http://www.w3.org/ns/prov#atLocation https://datadryad.org/downloads/file_stream/4663 https://w3id.org/delphi/resource/evidence/thompson1917-ch14-05--claim-test--dataset-1 http://www.w3.org/ns/prov#atLocation https://datadryad.org/downloads/file_stream/4664 https://w3id.org/delphi/resource/evidence/thompson1917-ch14-05--claim-test--dataset-1 http://www.w3.org/ns/prov#wasDerivedFrom https://datadryad.org/dataset/doi:10.5061/dryad.f9k77 https://w3id.org/delphi/resource/evidence/thompson1917-ch14-05--claim-test--dataset-1 https://w3id.org/delphi/ontology/hasChecksum sha256:1ae05773075326e64bd110bdd5dd90a6d78986d2fdff67936532ac51167b883d https://w3id.org/delphi/resource/evidence/thompson1917-ch14-05--claim-test--dataset-1 https://w3id.org/delphi/ontology/hasChecksum sha256:b3df75b467d92c08eb58a5a78576aa2ee5937153de7640b3ef8df14bd143f408 https://w3id.org/delphi/resource/evidence/thompson1917-ch14-05--claim-test--dataset-1 https://w3id.org/delphi/ontology/hasChecksum sha256:f0fe52a415366cdd568c260739eaca90e867d3db687878bd800ce731799ab8d4 https://w3id.org/np/RA0iXYk6xka0d59w2nUCvAHrSWQVyQnawCTFBSmaNgYHo/provenance https://w3id.org/delphi/resource/agent/delphisci-claim-tester-claude-fable-5-1-thinking-high http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#SoftwareAgent https://w3id.org/delphi/resource/agent/delphisci-claim-tester-claude-fable-5-1-thinking-high http://www.w3.org/2000/01/rdf-schema#label delphisci claim tester (claude-fable-5-1-thinking-high; 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